STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10766.1PFAM: integrase family protein; KEGG: lpn:lpg1229 site specific recombinase; Belongs to the 'phage' integrase family. (344 aa)    
Predicted Functional Partners:
ACZ09893.1
KEGG: nse:NSE_0416 putative competence protein F.
  
    0.513
ACZ09388.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ccv:CCV52592_0372 oxygen-independent coproporphyrinogen III oxidase; Belongs to the 'phage' integrase family.
  
     0.499
ACZ08126.1
TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; KEGG: par:Psyc_1001 PBSX family phage terminase large subunit.
  
   
 0.489
ACZ10765.1
Putative phage repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: cjr:CJE0569 phage repressor protein, putative.
  
  
 0.487
ACZ09550.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dal:Dalk_0825 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.485
ACZ08288.1
TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; KEGG: par:Psyc_1001 PBSX family phage terminase large subunit.
  
   
 0.473
ACZ09279.1
PFAM: Prephenate dehydrogenase; KEGG: maq:Maqu_1025 3-phosphoshikimate 1- carboxyvinyltransferase.
  
    0.467
ACZ08188.1
Prophage antirepressor; PFAM: BRO domain protein; KEGG: plu:plu2883 hypothetical protein.
 
  
 0.459
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
  
 0.457
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
  
 0.457
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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