STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10886.1PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eca:ECA2140 putative oxidoreductase. (357 aa)    
Predicted Functional Partners:
ACZ10884.1
PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: dal:Dalk_1674 oxidoreductase domain protein.
 
     0.840
ACZ10885.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:RL0824 putative oxidoreductase.
 
     0.795
ACZ08066.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bja:bll7636 hypothetical protein.
 
  
 0.728
ACZ10887.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein).
     
 0.696
ACZ10883.1
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein.
     
 0.608
ACZ08347.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein.
 
  
 0.517
ACZ10877.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll1734 hypothetical protein.
 
  
 0.510
ACZ10882.1
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein.
 
   
 0.494
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gme:Gmet_2360 lysyl-tRNA synthetase, class-2; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.476
ACZ10881.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component.
 
   
 0.451
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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