STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10897.1PFAM: regulatory protein TetR; KEGG: avn:Avin_00620 transcriptional regulatory protein, TetR family. (208 aa)    
Predicted Functional Partners:
ACZ10896.1
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
 
   
 0.783
ACZ10893.1
PFAM: secretion protein HlyD family protein; KEGG: pag:PLES_25901 membrane fusion protein.
 
   
 0.768
ACZ10895.1
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative.
 
   
 0.768
ACZ10894.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pag:PLES_25911 ATP-binding protein.
 
   
 0.761
ACZ10892.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein.
 
   
 0.705
ACZ10072.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family.
 
  
 0.525
ACZ10898.1
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
     
 0.429
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.