STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10913.1Hypothetical protein; KEGG: pat:Patl_3198 helix-hairpin-helix repeat- containing competence protein ComEA. (179 aa)    
Predicted Functional Partners:
ACZ10914.1
PFAM: protein of unknown function DUF421; KEGG: reu:Reut_A3332 hypothetical protein.
       0.647
ACZ10917.1
Coproporphyrinogen dehydrogenase; KEGG: bas:BUsg532 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.583
ACZ07129.1
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: geo:Geob_3081 peptidase A24A domain protein.
  
  
 0.564
ACZ10915.1
PFAM: protein of unknown function DUF819; KEGG: nmc:NMC1730 putative integral membrane protein.
       0.540
ACZ10916.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_26720 iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein).
  
    0.534
ACZ07116.1
PFAM: type II secretion system protein; KEGG: hdu:HD1125 pili/fimbriae biogenesis protein.
  
  
 0.518
uppP
Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.516
ACZ07516.1
PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: noc:Noc_2895 type II secretion system protein E.
  
  
 0.513
ACZ10918.1
Hypothetical protein.
       0.508
ACZ08681.1
KEGG: hypothetical protein.
  
  
 0.486
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.