STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10939.1PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2007 glycoside hydrolase family protein. (460 aa)    
Predicted Functional Partners:
ACZ10937.1
TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vsp:VS_0165 putative PTS system, maltose and glucose-specific IIABC components.
  
  
 0.738
ACZ10938.1
PFAM: PHP domain protein; KEGG: pzu:PHZ_c3042 hypothetical protein.
 
     0.708
ACZ10936.1
PFAM: MgtC/SapB transporter; KEGG: bgl:bglu_2g21640 MgtC family membrane protein.
       0.643
ACZ10940.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_2006 RpiR family transcriptional regulator.
 
  
 0.639
ACZ10163.1
TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: tau:Tola_2656 PTS system, alpha-glucoside- specific IIBC subunit.
 
  
 0.440
ACZ10496.1
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: pmr:PMI2983 phosphosugar isomerase/binding protein.
 
  
 0.422
ACZ10941.1
PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: nis:NIS_1700 hypothetical protein.
       0.421
ACZ10935.1
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: kpe:KPK_5266 sorbitol operon regulator.
     
 0.420
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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