Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO1 | VDBG_00276 | C9SA05 | C9S569 | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | Predicted protein. | 0.862 |
SHO1 | VDBG_00694 | C9SA05 | C9S6X5 | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | SH3 domain-containing protein. | 0.639 |
SHO1 | VDBG_07951 | C9SA05 | C9SSS6 | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.885 |
SHO1 | VDBG_09851 | C9SA05 | C9SY76 | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | Predicted protein. | 0.885 |
VDBG_00276 | SHO1 | C9S569 | C9SA05 | Predicted protein. | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | 0.862 |
VDBG_00276 | VDBG_00559 | C9S569 | C9S6D9 | Predicted protein. | Vacuolar-sorting protein snf7. | 0.996 |
VDBG_00276 | VDBG_00694 | C9S569 | C9S6X5 | Predicted protein. | SH3 domain-containing protein. | 0.937 |
VDBG_00276 | VDBG_01201 | C9S569 | C9S5V3 | Predicted protein. | Magnesium-dependent phosphatase. | 0.869 |
VDBG_00276 | VDBG_01373 | C9S569 | C9S7P7 | Predicted protein. | GTP-binding protein RHO1. | 0.650 |
VDBG_00276 | VDBG_02142 | C9S569 | C9S9H0 | Predicted protein. | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.652 |
VDBG_00276 | VDBG_02308 | C9S569 | C9S9Y6 | Predicted protein. | GTP-binding protein RHO3. | 0.650 |
VDBG_00276 | VDBG_07951 | C9S569 | C9SSS6 | Predicted protein. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.672 |
VDBG_00276 | VDBG_09282 | C9S569 | C9SWK7 | Predicted protein. | Class E vacuolar protein-sorting machinery protein HSE1. | 0.862 |
VDBG_00276 | VDBG_09851 | C9S569 | C9SY76 | Predicted protein. | Predicted protein. | 0.672 |
VDBG_00559 | VDBG_00276 | C9S6D9 | C9S569 | Vacuolar-sorting protein snf7. | Predicted protein. | 0.996 |
VDBG_00559 | VDBG_07951 | C9S6D9 | C9SSS6 | Vacuolar-sorting protein snf7. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.664 |
VDBG_00559 | VDBG_09282 | C9S6D9 | C9SWK7 | Vacuolar-sorting protein snf7. | Class E vacuolar protein-sorting machinery protein HSE1. | 0.509 |
VDBG_00559 | VDBG_09851 | C9S6D9 | C9SY76 | Vacuolar-sorting protein snf7. | Predicted protein. | 0.536 |
VDBG_00694 | SHO1 | C9S6X5 | C9SA05 | SH3 domain-containing protein. | High osmolarity signaling protein SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity. | 0.639 |
VDBG_00694 | VDBG_00276 | C9S6X5 | C9S569 | SH3 domain-containing protein. | Predicted protein. | 0.937 |
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