Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00336 | VDBG_00766 | C9S5F7 | C9S773 | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.435 |
VDBG_00336 | VDBG_06582 | C9S5F7 | C9SNV7 | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | Nitrate reductase. | 0.435 |
VDBG_00336 | VDBG_07300 | C9S5F7 | C9SQR5 | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | Cytoplasm protein; Belongs to the cytochrome b5 family. | 0.624 |
VDBG_00336 | VDBG_07661 | C9S5F7 | C9SRY6 | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | Predicted protein. | 0.435 |
VDBG_00766 | VDBG_00336 | C9S773 | C9S5F7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | 0.435 |
VDBG_00766 | VDBG_06582 | C9S773 | C9SNV7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.989 |
VDBG_00766 | VDBG_07300 | C9S773 | C9SQR5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytoplasm protein; Belongs to the cytochrome b5 family. | 0.890 |
VDBG_00766 | VDBG_07661 | C9S773 | C9SRY6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Predicted protein. | 0.903 |
VDBG_06582 | VDBG_00336 | C9SNV7 | C9S5F7 | Nitrate reductase. | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | 0.435 |
VDBG_06582 | VDBG_00766 | C9SNV7 | C9S773 | Nitrate reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.989 |
VDBG_06582 | VDBG_07300 | C9SNV7 | C9SQR5 | Nitrate reductase. | Cytoplasm protein; Belongs to the cytochrome b5 family. | 0.890 |
VDBG_06582 | VDBG_07661 | C9SNV7 | C9SRY6 | Nitrate reductase. | Predicted protein. | 0.903 |
VDBG_07300 | VDBG_00336 | C9SQR5 | C9S5F7 | Cytoplasm protein; Belongs to the cytochrome b5 family. | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | 0.624 |
VDBG_07300 | VDBG_00766 | C9SQR5 | C9S773 | Cytoplasm protein; Belongs to the cytochrome b5 family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.890 |
VDBG_07300 | VDBG_06582 | C9SQR5 | C9SNV7 | Cytoplasm protein; Belongs to the cytochrome b5 family. | Nitrate reductase. | 0.890 |
VDBG_07300 | VDBG_07661 | C9SQR5 | C9SRY6 | Cytoplasm protein; Belongs to the cytochrome b5 family. | Predicted protein. | 0.890 |
VDBG_07661 | VDBG_00336 | C9SRY6 | C9S5F7 | Predicted protein. | 3-chlorobenzoate-3,4-dioxygenase reductase subunit. | 0.435 |
VDBG_07661 | VDBG_00766 | C9SRY6 | C9S773 | Predicted protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.903 |
VDBG_07661 | VDBG_06582 | C9SRY6 | C9SNV7 | Predicted protein. | Nitrate reductase. | 0.903 |
VDBG_07661 | VDBG_07300 | C9SRY6 | C9SQR5 | Predicted protein. | Cytoplasm protein; Belongs to the cytochrome b5 family. | 0.890 |