Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00425 | VDBG_00699 | C9S5U2 | C9S6Y0 | J domain-containing protein. | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | 0.494 |
VDBG_00425 | VDBG_00763 | C9S5U2 | C9S770 | J domain-containing protein. | Heat shock protein Hsp88. | 0.620 |
VDBG_00425 | VDBG_00829 | C9S5U2 | C9S7F9 | J domain-containing protein. | Heat shock protein SSC1; Belongs to the heat shock protein 70 family. | 0.561 |
VDBG_00425 | VDBG_00900 | C9S5U2 | C9S7Q6 | J domain-containing protein. | Uncharacterized protein. | 0.556 |
VDBG_00425 | VDBG_03345 | C9S5U2 | C9SDY9 | J domain-containing protein. | Transcription factor prr1. | 0.578 |
VDBG_00425 | VDBG_05412 | C9S5U2 | C9SKT5 | J domain-containing protein. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.531 |
VDBG_00425 | VDBG_05606 | C9S5U2 | C9SLC9 | J domain-containing protein. | Stress protein ORP150. | 0.507 |
VDBG_00425 | VDBG_07946 | C9S5U2 | C9SSS1 | J domain-containing protein. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.560 |
VDBG_00425 | VDBG_09407 | C9S5U2 | C9SXA7 | J domain-containing protein. | Heat shock protein. | 0.556 |
VDBG_00425 | VDBG_09408 | C9S5U2 | C9SXA8 | J domain-containing protein. | Flavin_Reduct domain-containing protein. | 0.556 |
VDBG_00699 | VDBG_00425 | C9S6Y0 | C9S5U2 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | J domain-containing protein. | 0.494 |
VDBG_00699 | VDBG_00763 | C9S6Y0 | C9S770 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Heat shock protein Hsp88. | 0.807 |
VDBG_00699 | VDBG_00829 | C9S6Y0 | C9S7F9 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Heat shock protein SSC1; Belongs to the heat shock protein 70 family. | 0.620 |
VDBG_00699 | VDBG_00900 | C9S6Y0 | C9S7Q6 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Uncharacterized protein. | 0.771 |
VDBG_00699 | VDBG_03345 | C9S6Y0 | C9SDY9 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Transcription factor prr1. | 0.709 |
VDBG_00699 | VDBG_05412 | C9S6Y0 | C9SKT5 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.695 |
VDBG_00699 | VDBG_07946 | C9S6Y0 | C9SSS1 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.725 |
VDBG_00699 | VDBG_09407 | C9S6Y0 | C9SXA7 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Heat shock protein. | 0.778 |
VDBG_00699 | VDBG_09408 | C9S6Y0 | C9SXA8 | Chaperone protein dnaK; Belongs to the heat shock protein 70 family. | Flavin_Reduct domain-containing protein. | 0.778 |
VDBG_00763 | VDBG_00425 | C9S770 | C9S5U2 | Heat shock protein Hsp88. | J domain-containing protein. | 0.620 |
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