STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_01291DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (249 aa)    
Predicted Functional Partners:
VDBG_04593
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
 0.996
VDBG_04832
DNA replication complex GINS protein PSF1.
   
 0.993
VDBG_08962
DNA replication complex GINS protein PSF3.
   
 0.990
VDBG_00795
Cell division control protein.
   
 0.981
VDBG_00330
DNA polymerase epsilon subunit B.
   
 
 0.953
VDBG_04551
DNA helicase; Belongs to the MCM family.
   
 0.952
VDBG_04264
DNA replication licensing factor mcm2; Belongs to the MCM family.
   
 0.950
VDBG_05546
Minichromosome loss protein.
   
 
 0.949
VDBG_03790
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 
 0.943
VDBG_08337
DNA helicase; Belongs to the MCM family.
   
 0.942
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.