STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_00836STU1. (1114 aa)    
Predicted Functional Partners:
VDBG_04624
Keratin-associated protein 10-7.
    
 0.672
VDBG_02653
Microtubule-associated protein RP/EB family member 1.
    
 
 0.650
VDBG_08181
Tubulin beta-2 chain.
    
 
 0.599
VDBG_06924
Uncharacterized protein.
    
 
 0.597
VDBG_08950
Spindle pole body component alp14.
    
 
 0.537
VDBG_03360
Inner centromere protein mis6.
    
 
 0.460
VDBG_07387
Kinesin-II 85 kDa subunit; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.407
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.