Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00263 | VDBG_00920 | C9S556 | C9S7S6 | Glutamate-cysteine ligase modifier subunit. | Cysteine dioxygenase. | 0.813 |
VDBG_00263 | VDBG_01731 | C9S556 | C9SB72 | Glutamate-cysteine ligase modifier subunit. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.805 |
VDBG_00263 | VDBG_02836 | C9S556 | C9SCB2 | Glutamate-cysteine ligase modifier subunit. | Cysteine synthase. | 0.819 |
VDBG_00263 | VDBG_03027 | C9S556 | C9SCV3 | Glutamate-cysteine ligase modifier subunit. | O-acetylhomoserine (Thiol)-lyase. | 0.804 |
VDBG_00263 | VDBG_03326 | C9S556 | C9SDU7 | Glutamate-cysteine ligase modifier subunit. | Aspartate aminotransferase. | 0.811 |
VDBG_00263 | VDBG_04026 | C9S556 | C9SFD1 | Glutamate-cysteine ligase modifier subunit. | Aspartate aminotransferase. | 0.814 |
VDBG_00263 | VDBG_04339 | C9S556 | C9SJ68 | Glutamate-cysteine ligase modifier subunit. | Cystathionine beta-lyase. | 0.809 |
VDBG_00263 | VDBG_06151 | C9S556 | C9SMM7 | Glutamate-cysteine ligase modifier subunit. | Cystathionine gamma-lyase. | 0.809 |
VDBG_00263 | VDBG_07576 | C9S556 | C9SRQ1 | Glutamate-cysteine ligase modifier subunit. | O-acetylhomoserine (Thiol)-lyase. | 0.804 |
VDBG_00263 | VDBG_08523 | C9S556 | C9SUA2 | Glutamate-cysteine ligase modifier subunit. | Glutamate decarboxylase. | 0.805 |
VDBG_00920 | VDBG_00263 | C9S7S6 | C9S556 | Cysteine dioxygenase. | Glutamate-cysteine ligase modifier subunit. | 0.813 |
VDBG_00920 | VDBG_01731 | C9S7S6 | C9SB72 | Cysteine dioxygenase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.916 |
VDBG_00920 | VDBG_02836 | C9S7S6 | C9SCB2 | Cysteine dioxygenase. | Cysteine synthase. | 0.922 |
VDBG_00920 | VDBG_03027 | C9S7S6 | C9SCV3 | Cysteine dioxygenase. | O-acetylhomoserine (Thiol)-lyase. | 0.918 |
VDBG_00920 | VDBG_03326 | C9S7S6 | C9SDU7 | Cysteine dioxygenase. | Aspartate aminotransferase. | 0.914 |
VDBG_00920 | VDBG_04026 | C9S7S6 | C9SFD1 | Cysteine dioxygenase. | Aspartate aminotransferase. | 0.916 |
VDBG_00920 | VDBG_04339 | C9S7S6 | C9SJ68 | Cysteine dioxygenase. | Cystathionine beta-lyase. | 0.942 |
VDBG_00920 | VDBG_06151 | C9S7S6 | C9SMM7 | Cysteine dioxygenase. | Cystathionine gamma-lyase. | 0.942 |
VDBG_00920 | VDBG_07576 | C9S7S6 | C9SRQ1 | Cysteine dioxygenase. | O-acetylhomoserine (Thiol)-lyase. | 0.918 |
VDBG_00920 | VDBG_08523 | C9S7S6 | C9SUA2 | Cysteine dioxygenase. | Glutamate decarboxylase. | 0.916 |
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