STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_00996Phosphoglycerate mutase family protein. (648 aa)    
Predicted Functional Partners:
VDBG_01174
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.635
VDBG_05192
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.626
VDBG_01664
6-phosphofructokinase.
   
 0.616
VDBG_01442
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.615
VDBG_05867
Enolase.
    
 0.613
VDBG_00093
Phosphoserine aminotransferase.
    
 0.604
VDBG_00332
HAD superfamily hydrolase.
    
 0.566
UTR4
Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
     
 0.550
VDBG_03393
Alanine-glyoxylate aminotransferase.
  
 
 0.534
VDBG_06733
NUDIX-like domain-containing protein.
    
  0.502
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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