Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00721 | VDBG_01429 | C9S702 | C9S870 | PHD domain-containing protein. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.493 |
VDBG_00721 | VDBG_03738 | C9S702 | C9SH35 | PHD domain-containing protein. | Transcriptional regulatory protein SIN3. | 0.793 |
VDBG_00721 | VDBG_05251 | C9S702 | C9SKC4 | PHD domain-containing protein. | Uncharacterized protein. | 0.544 |
VDBG_00721 | VDBG_07293 | C9S702 | C9SQQ8 | PHD domain-containing protein. | Histone deacetylase. | 0.867 |
VDBG_00721 | VDBG_08028 | C9S702 | C9ST03 | PHD domain-containing protein. | RXT2_N domain-containing protein. | 0.836 |
VDBG_01429 | VDBG_00721 | C9S870 | C9S702 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | PHD domain-containing protein. | 0.493 |
VDBG_01429 | VDBG_03738 | C9S870 | C9SH35 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Transcriptional regulatory protein SIN3. | 0.495 |
VDBG_01429 | VDBG_05251 | C9S870 | C9SKC4 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Uncharacterized protein. | 0.470 |
VDBG_01429 | VDBG_07293 | C9S870 | C9SQQ8 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Histone deacetylase. | 0.475 |
VDBG_01429 | VDBG_08028 | C9S870 | C9ST03 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | RXT2_N domain-containing protein. | 0.475 |
VDBG_03738 | VDBG_00721 | C9SH35 | C9S702 | Transcriptional regulatory protein SIN3. | PHD domain-containing protein. | 0.793 |
VDBG_03738 | VDBG_01429 | C9SH35 | C9S870 | Transcriptional regulatory protein SIN3. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.495 |
VDBG_03738 | VDBG_05251 | C9SH35 | C9SKC4 | Transcriptional regulatory protein SIN3. | Uncharacterized protein. | 0.789 |
VDBG_03738 | VDBG_07293 | C9SH35 | C9SQQ8 | Transcriptional regulatory protein SIN3. | Histone deacetylase. | 0.981 |
VDBG_03738 | VDBG_08028 | C9SH35 | C9ST03 | Transcriptional regulatory protein SIN3. | RXT2_N domain-containing protein. | 0.714 |
VDBG_05251 | VDBG_00721 | C9SKC4 | C9S702 | Uncharacterized protein. | PHD domain-containing protein. | 0.544 |
VDBG_05251 | VDBG_01429 | C9SKC4 | C9S870 | Uncharacterized protein. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.470 |
VDBG_05251 | VDBG_03738 | C9SKC4 | C9SH35 | Uncharacterized protein. | Transcriptional regulatory protein SIN3. | 0.789 |
VDBG_05251 | VDBG_07293 | C9SKC4 | C9SQQ8 | Uncharacterized protein. | Histone deacetylase. | 0.921 |
VDBG_07293 | VDBG_00721 | C9SQQ8 | C9S702 | Histone deacetylase. | PHD domain-containing protein. | 0.867 |
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