Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01441 | VDBG_02265 | C9S882 | C9S9U3 | Predicted protein. | 26S proteasome regulatory subunit RPN5. | 0.985 |
VDBG_01441 | VDBG_03610 | C9S882 | C9SGG1 | Predicted protein. | 26S proteasome non-ATPase regulatory subunit 3. | 0.995 |
VDBG_01441 | VDBG_03629 | C9S882 | C9SGK3 | Predicted protein. | 26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. | 0.973 |
VDBG_01441 | VDBG_03999 | C9S882 | C9SFA4 | Predicted protein. | 26S proteasome regulatory subunit rpn-8. | 0.981 |
VDBG_01441 | VDBG_04905 | C9S882 | C9SIM3 | Predicted protein. | 26S protease regulatory subunit 7; Belongs to the AAA ATPase family. | 0.974 |
VDBG_01441 | VDBG_05129 | C9S882 | C9SK02 | Predicted protein. | 26S proteasome non-ATPase regulatory subunit 4. | 0.989 |
VDBG_01441 | VDBG_07100 | C9S882 | C9SQ65 | Predicted protein. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.975 |
VDBG_01441 | VDBG_07294 | C9S882 | C9SQQ9 | Predicted protein. | 26S proteasome regulatory subunit rpn11. | 0.988 |
VDBG_01441 | VDBG_07459 | C9S882 | C9SRD4 | Predicted protein. | 26S proteasome regulatory subunit rpn12. | 0.983 |
VDBG_01441 | VDBG_08295 | C9S882 | C9STM4 | Predicted protein. | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.985 |
VDBG_02265 | VDBG_01441 | C9S9U3 | C9S882 | 26S proteasome regulatory subunit RPN5. | Predicted protein. | 0.985 |
VDBG_02265 | VDBG_03610 | C9S9U3 | C9SGG1 | 26S proteasome regulatory subunit RPN5. | 26S proteasome non-ATPase regulatory subunit 3. | 0.999 |
VDBG_02265 | VDBG_03629 | C9S9U3 | C9SGK3 | 26S proteasome regulatory subunit RPN5. | 26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. | 0.999 |
VDBG_02265 | VDBG_03999 | C9S9U3 | C9SFA4 | 26S proteasome regulatory subunit RPN5. | 26S proteasome regulatory subunit rpn-8. | 0.999 |
VDBG_02265 | VDBG_04905 | C9S9U3 | C9SIM3 | 26S proteasome regulatory subunit RPN5. | 26S protease regulatory subunit 7; Belongs to the AAA ATPase family. | 0.999 |
VDBG_02265 | VDBG_05129 | C9S9U3 | C9SK02 | 26S proteasome regulatory subunit RPN5. | 26S proteasome non-ATPase regulatory subunit 4. | 0.999 |
VDBG_02265 | VDBG_07100 | C9S9U3 | C9SQ65 | 26S proteasome regulatory subunit RPN5. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.999 |
VDBG_02265 | VDBG_07294 | C9S9U3 | C9SQQ9 | 26S proteasome regulatory subunit RPN5. | 26S proteasome regulatory subunit rpn11. | 0.999 |
VDBG_02265 | VDBG_07459 | C9S9U3 | C9SRD4 | 26S proteasome regulatory subunit RPN5. | 26S proteasome regulatory subunit rpn12. | 0.999 |
VDBG_02265 | VDBG_08295 | C9S9U3 | C9STM4 | 26S proteasome regulatory subunit RPN5. | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.999 |
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