STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_01037MOSC domain-containing protein. (461 aa)    
Predicted Functional Partners:
VDBG_00766
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.967
VDBG_06582
Nitrate reductase.
   
 
 0.967
VDBG_07661
Predicted protein.
   
 
 0.967
VDBG_07300
Cytoplasm protein; Belongs to the cytochrome b5 family.
   
 
 0.956
VDBG_06208
Fe2OG dioxygenase domain-containing protein.
     
 0.629
VDBG_06716
Molybdenum cofactor biosynthesis protein C.
     
 0.543
VDBG_05073
Sulfite oxidase.
      
 0.493
VDBG_07101
Sulfite oxidase.
      
 0.493
VDBG_00775
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
     
 0.461
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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