Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00162 | VDBG_00259 | C9S8X8 | C9S552 | Fatty acid synthase S-acetyltransferase. | Malonyl CoA-acyl carrier protein transacylase. | 0.411 |
VDBG_00162 | VDBG_00576 | C9S8X8 | C9S6F6 | Fatty acid synthase S-acetyltransferase. | Amino acid adenylation domain-containing protein. | 0.486 |
VDBG_00162 | VDBG_03055 | C9S8X8 | C9SCY1 | Fatty acid synthase S-acetyltransferase. | Gramicidin S synthetase 1. | 0.421 |
VDBG_00162 | VDBG_04297 | C9S8X8 | C9SGW8 | Fatty acid synthase S-acetyltransferase. | Thioesterase family protein. | 0.438 |
VDBG_00162 | VDBG_05322 | C9S8X8 | C9SKJ5 | Fatty acid synthase S-acetyltransferase. | ATP-citrate synthase subunit 1. | 0.412 |
VDBG_00162 | VDBG_05323 | C9S8X8 | C9SKJ6 | Fatty acid synthase S-acetyltransferase. | ATP-citrate synthase. | 0.412 |
VDBG_00162 | VDBG_06075 | C9S8X8 | C9SMF1 | Fatty acid synthase S-acetyltransferase. | Uncharacterized protein. | 0.458 |
VDBG_00162 | VDBG_08316 | C9S8X8 | C9STP5 | Fatty acid synthase S-acetyltransferase. | Uncharacterized protein. | 0.458 |
VDBG_00162 | VDBG_09247 | C9S8X8 | C9SWH2 | Fatty acid synthase S-acetyltransferase. | Uncharacterized protein. | 0.458 |
VDBG_00259 | VDBG_00162 | C9S552 | C9S8X8 | Malonyl CoA-acyl carrier protein transacylase. | Fatty acid synthase S-acetyltransferase. | 0.411 |
VDBG_00259 | VDBG_04297 | C9S552 | C9SGW8 | Malonyl CoA-acyl carrier protein transacylase. | Thioesterase family protein. | 0.819 |
VDBG_00576 | VDBG_00162 | C9S6F6 | C9S8X8 | Amino acid adenylation domain-containing protein. | Fatty acid synthase S-acetyltransferase. | 0.486 |
VDBG_03055 | VDBG_00162 | C9SCY1 | C9S8X8 | Gramicidin S synthetase 1. | Fatty acid synthase S-acetyltransferase. | 0.421 |
VDBG_04297 | VDBG_00162 | C9SGW8 | C9S8X8 | Thioesterase family protein. | Fatty acid synthase S-acetyltransferase. | 0.438 |
VDBG_04297 | VDBG_00259 | C9SGW8 | C9S552 | Thioesterase family protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.819 |
VDBG_05322 | VDBG_00162 | C9SKJ5 | C9S8X8 | ATP-citrate synthase subunit 1. | Fatty acid synthase S-acetyltransferase. | 0.412 |
VDBG_05322 | VDBG_05323 | C9SKJ5 | C9SKJ6 | ATP-citrate synthase subunit 1. | ATP-citrate synthase. | 0.999 |
VDBG_05323 | VDBG_00162 | C9SKJ6 | C9S8X8 | ATP-citrate synthase. | Fatty acid synthase S-acetyltransferase. | 0.412 |
VDBG_05323 | VDBG_05322 | C9SKJ6 | C9SKJ5 | ATP-citrate synthase. | ATP-citrate synthase subunit 1. | 0.999 |
VDBG_06075 | VDBG_00162 | C9SMF1 | C9S8X8 | Uncharacterized protein. | Fatty acid synthase S-acetyltransferase. | 0.458 |
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