Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00196 | VDBG_00523 | C9S941 | C9S6A3 | N-terminal amidase. | Spermidine synthase. | 0.501 |
VDBG_00196 | VDBG_02371 | C9S941 | C9SA49 | N-terminal amidase. | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | 0.465 |
VDBG_00196 | VDBG_03291 | C9S941 | C9SDR2 | N-terminal amidase. | Allantoinase. | 0.405 |
VDBG_00196 | VDBG_04023 | C9S941 | C9SFC8 | N-terminal amidase. | Tryptophan synthase. | 0.520 |
VDBG_00196 | VDBG_05273 | C9S941 | C9SKE6 | N-terminal amidase. | Urea amidolyase. | 0.412 |
VDBG_00196 | VDBG_06681 | C9S941 | C9SP56 | N-terminal amidase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.537 |
VDBG_00196 | VDBG_07276 | C9S941 | C9SQP1 | N-terminal amidase. | Predicted protein. | 0.405 |
VDBG_00196 | VDBG_10056 | C9S941 | C9SYT1 | N-terminal amidase. | Glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.412 |
VDBG_00523 | VDBG_00196 | C9S6A3 | C9S941 | Spermidine synthase. | N-terminal amidase. | 0.501 |
VDBG_00523 | VDBG_04023 | C9S6A3 | C9SFC8 | Spermidine synthase. | Tryptophan synthase. | 0.626 |
VDBG_00523 | VDBG_06681 | C9S6A3 | C9SP56 | Spermidine synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.659 |
VDBG_02371 | VDBG_00196 | C9SA49 | C9S941 | Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family. | N-terminal amidase. | 0.465 |
VDBG_03291 | VDBG_00196 | C9SDR2 | C9S941 | Allantoinase. | N-terminal amidase. | 0.405 |
VDBG_03291 | VDBG_05273 | C9SDR2 | C9SKE6 | Allantoinase. | Urea amidolyase. | 0.611 |
VDBG_03291 | VDBG_06681 | C9SDR2 | C9SP56 | Allantoinase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.743 |
VDBG_04023 | VDBG_00196 | C9SFC8 | C9S941 | Tryptophan synthase. | N-terminal amidase. | 0.520 |
VDBG_04023 | VDBG_00523 | C9SFC8 | C9S6A3 | Tryptophan synthase. | Spermidine synthase. | 0.626 |
VDBG_04023 | VDBG_05273 | C9SFC8 | C9SKE6 | Tryptophan synthase. | Urea amidolyase. | 0.725 |
VDBG_04023 | VDBG_06681 | C9SFC8 | C9SP56 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
VDBG_04023 | VDBG_10056 | C9SFC8 | C9SYT1 | Tryptophan synthase. | Glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.725 |
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