Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01634 | VDBG_02505 | C9SAV1 | C9SBB4 | Phosphopantetheinyl transferase. | Fibronectin type III domain-containing protein. | 0.757 |
VDBG_01634 | VDBG_04085 | C9SAV1 | C9SFN1 | Phosphopantetheinyl transferase. | Dolichol kinase. | 0.501 |
VDBG_01634 | VDBG_06824 | C9SAV1 | C9SPJ9 | Phosphopantetheinyl transferase. | Dephospho-CoA kinase. | 0.900 |
VDBG_01634 | VDBG_08403 | C9SAV1 | C9STY2 | Phosphopantetheinyl transferase. | Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.400 |
VDBG_01634 | VDBG_08815 | C9SAV1 | C9SV90 | Phosphopantetheinyl transferase. | Vesicular integral-membrane protein VIP36. | 0.517 |
VDBG_02505 | VDBG_01634 | C9SBB4 | C9SAV1 | Fibronectin type III domain-containing protein. | Phosphopantetheinyl transferase. | 0.757 |
VDBG_04085 | VDBG_01634 | C9SFN1 | C9SAV1 | Dolichol kinase. | Phosphopantetheinyl transferase. | 0.501 |
VDBG_06824 | VDBG_01634 | C9SPJ9 | C9SAV1 | Dephospho-CoA kinase. | Phosphopantetheinyl transferase. | 0.900 |
VDBG_08403 | VDBG_01634 | C9STY2 | C9SAV1 | Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Phosphopantetheinyl transferase. | 0.400 |
VDBG_08815 | VDBG_01634 | C9SV90 | C9SAV1 | Vesicular integral-membrane protein VIP36. | Phosphopantetheinyl transferase. | 0.517 |