Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00598 | VDBG_01427 | C9S6J9 | C9S868 | N-terminal acetyltransferase A complex catalytic subunit ard1. | NMDA receptor-regulated protein. | 0.994 |
VDBG_00598 | VDBG_01638 | C9S6J9 | C9SAV5 | N-terminal acetyltransferase A complex catalytic subunit ard1. | Uncharacterized protein. | 0.995 |
VDBG_00598 | VDBG_02477 | C9S6J9 | C9SB08 | N-terminal acetyltransferase A complex catalytic subunit ard1. | Uncharacterized protein. | 0.625 |
VDBG_00598 | VDBG_03919 | C9S6J9 | C9SF24 | N-terminal acetyltransferase A complex catalytic subunit ard1. | N-acetyltransferase domain-containing protein. | 0.625 |
VDBG_00598 | VDBG_05400 | C9S6J9 | C9SKS3 | N-terminal acetyltransferase A complex catalytic subunit ard1. | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.692 |
VDBG_00598 | VDBG_08644 | C9S6J9 | C9SUR9 | N-terminal acetyltransferase A complex catalytic subunit ard1. | 60S ribosomal protein L23a. | 0.713 |
VDBG_00598 | VDBG_09718 | C9S6J9 | C9SXU3 | N-terminal acetyltransferase A complex catalytic subunit ard1. | N-terminal acetyltransferase C complex catalytic subunit MAK3. | 0.625 |
VDBG_01427 | VDBG_00598 | C9S868 | C9S6J9 | NMDA receptor-regulated protein. | N-terminal acetyltransferase A complex catalytic subunit ard1. | 0.994 |
VDBG_01427 | VDBG_01638 | C9S868 | C9SAV5 | NMDA receptor-regulated protein. | Uncharacterized protein. | 0.996 |
VDBG_01427 | VDBG_02477 | C9S868 | C9SB08 | NMDA receptor-regulated protein. | Uncharacterized protein. | 0.729 |
VDBG_01427 | VDBG_03919 | C9S868 | C9SF24 | NMDA receptor-regulated protein. | N-acetyltransferase domain-containing protein. | 0.549 |
VDBG_01427 | VDBG_05400 | C9S868 | C9SKS3 | NMDA receptor-regulated protein. | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.462 |
VDBG_01427 | VDBG_08644 | C9S868 | C9SUR9 | NMDA receptor-regulated protein. | 60S ribosomal protein L23a. | 0.568 |
VDBG_01427 | VDBG_09342 | C9S868 | C9SX42 | NMDA receptor-regulated protein. | N-acetyltransferase. | 0.633 |
VDBG_01427 | VDBG_09718 | C9S868 | C9SXU3 | NMDA receptor-regulated protein. | N-terminal acetyltransferase C complex catalytic subunit MAK3. | 0.625 |
VDBG_01638 | VDBG_00598 | C9SAV5 | C9S6J9 | Uncharacterized protein. | N-terminal acetyltransferase A complex catalytic subunit ard1. | 0.995 |
VDBG_01638 | VDBG_01427 | C9SAV5 | C9S868 | Uncharacterized protein. | NMDA receptor-regulated protein. | 0.996 |
VDBG_01638 | VDBG_02141 | C9SAV5 | C9S9G9 | Uncharacterized protein. | SGF29 C-terminal domain-containing protein. | 0.750 |
VDBG_01638 | VDBG_02477 | C9SAV5 | C9SB08 | Uncharacterized protein. | Uncharacterized protein. | 0.642 |
VDBG_01638 | VDBG_03692 | C9SAV5 | C9SGW1 | Uncharacterized protein. | Transcriptional adapter 3. | 0.641 |
page 1 of 3