Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00323 | VDBG_01777 | C9S5E4 | C9SBD4 | Isocitrate lyase. | Malate synthase; Belongs to the malate synthase family. | 0.998 |
VDBG_00323 | VDBG_02299 | C9S5E4 | C9S9X7 | Isocitrate lyase. | Isocitrate lyase. | 0.908 |
VDBG_00323 | VDBG_03035 | C9S5E4 | C9SCW1 | Isocitrate lyase. | Citrate synthase; Belongs to the citrate synthase family. | 0.723 |
VDBG_00323 | VDBG_03393 | C9S5E4 | C9SE37 | Isocitrate lyase. | Alanine-glyoxylate aminotransferase. | 0.950 |
VDBG_00323 | VDBG_05406 | C9S5E4 | C9SKS9 | Isocitrate lyase. | Acetyl-coenzyme A synthetase. | 0.656 |
VDBG_00323 | VDBG_08589 | C9S5E4 | C9SUG8 | Isocitrate lyase. | Malate dehydrogenase. | 0.562 |
VDBG_00323 | VDBG_08654 | C9S5E4 | C9SUS9 | Isocitrate lyase. | Malate dehydrogenase. | 0.562 |
VDBG_01777 | VDBG_00323 | C9SBD4 | C9S5E4 | Malate synthase; Belongs to the malate synthase family. | Isocitrate lyase. | 0.998 |
VDBG_01777 | VDBG_02271 | C9SBD4 | C9S9U9 | Malate synthase; Belongs to the malate synthase family. | Fumarate hydratase. | 0.967 |
VDBG_01777 | VDBG_02299 | C9SBD4 | C9S9X7 | Malate synthase; Belongs to the malate synthase family. | Isocitrate lyase. | 0.991 |
VDBG_01777 | VDBG_03035 | C9SBD4 | C9SCW1 | Malate synthase; Belongs to the malate synthase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.976 |
VDBG_01777 | VDBG_03393 | C9SBD4 | C9SE37 | Malate synthase; Belongs to the malate synthase family. | Alanine-glyoxylate aminotransferase. | 0.965 |
VDBG_01777 | VDBG_03737 | C9SBD4 | C9SH34 | Malate synthase; Belongs to the malate synthase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.932 |
VDBG_01777 | VDBG_05406 | C9SBD4 | C9SKS9 | Malate synthase; Belongs to the malate synthase family. | Acetyl-coenzyme A synthetase. | 0.964 |
VDBG_01777 | VDBG_08589 | C9SBD4 | C9SUG8 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase. | 0.975 |
VDBG_01777 | VDBG_08654 | C9SBD4 | C9SUS9 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase. | 0.975 |
VDBG_01777 | VDBG_09981 | C9SBD4 | C9SYK6 | Malate synthase; Belongs to the malate synthase family. | Malic enzyme. | 0.966 |
VDBG_02271 | VDBG_01777 | C9S9U9 | C9SBD4 | Fumarate hydratase. | Malate synthase; Belongs to the malate synthase family. | 0.967 |
VDBG_02271 | VDBG_03035 | C9S9U9 | C9SCW1 | Fumarate hydratase. | Citrate synthase; Belongs to the citrate synthase family. | 0.932 |
VDBG_02271 | VDBG_03393 | C9S9U9 | C9SE37 | Fumarate hydratase. | Alanine-glyoxylate aminotransferase. | 0.765 |
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