STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_01818Phosducin family protein. (259 aa)    
Predicted Functional Partners:
VDBG_01189
T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family.
    
 
 0.916
VDBG_04904
T-complex protein 1 subunit delta.
    
 
 0.901
VDBG_03078
T-complex protein 1 subunit zeta.
   
 
 0.899
VDBG_02491
T-complex protein 1 subunit beta.
   
 
 0.889
VDBG_03089
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 
 0.882
VDBG_03388
T-complex protein 1 subunit gamma.
    
 
 0.880
VDBG_08936
T-complex protein 1 subunit theta.
    
 
 0.865
VDBG_07948
T-complex protein 1 subunit epsilon.
    
 
 0.852
VDBG_04078
Queuine tRNA-ribosyltransferase.
    
 
 0.646
VDBG_06681
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
      
 0.485
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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