STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_02017Predicted protein. (154 aa)    
Predicted Functional Partners:
VDBG_08598
Mitochondrial intermembrane space import and assembly protein 40-B.
    
 0.577
VDBG_06212
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
      
 0.493
VDBG_06605
UBA domain-containing protein.
      
 0.493
VDBG_01654
Uncharacterized protein.
      
 0.487
VDBG_02051
ATP synthase D chain.
   
   0.470
VDBG_08814
Mitochondrial import inner membrane translocase subunit TIM13; Belongs to the small Tim family.
   
 
 0.461
VDBG_09705
Sulfhydryl oxidase.
   
 
 0.452
VDBG_01186
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
  
 0.443
VDBG_03405
Cytochrome c oxidase polypeptide V.
   
  
 0.438
VDBG_04168
Cytochrome c oxidase polypeptide VI.
   
  
 0.437
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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