Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_03094 | VDBG_04023 | C9SD20 | C9SFC8 | Fic. | Tryptophan synthase. | 0.616 |
VDBG_03094 | VDBG_06462 | C9SD20 | C9SNI7 | Fic. | Phosphoserine phosphatase. | 0.481 |
VDBG_03094 | VDBG_07946 | C9SD20 | C9SSS1 | Fic. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.874 |
VDBG_03094 | VDBG_08468 | C9SD20 | C9SU47 | Fic. | MACRO domain-containing protein. | 0.520 |
VDBG_04023 | VDBG_03094 | C9SFC8 | C9SD20 | Tryptophan synthase. | Fic. | 0.616 |
VDBG_04023 | VDBG_06462 | C9SFC8 | C9SNI7 | Tryptophan synthase. | Phosphoserine phosphatase. | 0.973 |
VDBG_04023 | VDBG_07946 | C9SFC8 | C9SSS1 | Tryptophan synthase. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.517 |
VDBG_06462 | VDBG_03094 | C9SNI7 | C9SD20 | Phosphoserine phosphatase. | Fic. | 0.481 |
VDBG_06462 | VDBG_04023 | C9SNI7 | C9SFC8 | Phosphoserine phosphatase. | Tryptophan synthase. | 0.973 |
VDBG_07946 | VDBG_03094 | C9SSS1 | C9SD20 | Hsp70-like protein; Belongs to the heat shock protein 70 family. | Fic. | 0.874 |
VDBG_07946 | VDBG_04023 | C9SSS1 | C9SFC8 | Hsp70-like protein; Belongs to the heat shock protein 70 family. | Tryptophan synthase. | 0.517 |
VDBG_07946 | VDBG_08468 | C9SSS1 | C9SU47 | Hsp70-like protein; Belongs to the heat shock protein 70 family. | MACRO domain-containing protein. | 0.402 |
VDBG_08468 | VDBG_03094 | C9SU47 | C9SD20 | MACRO domain-containing protein. | Fic. | 0.520 |
VDBG_08468 | VDBG_07946 | C9SU47 | C9SSS1 | MACRO domain-containing protein. | Hsp70-like protein; Belongs to the heat shock protein 70 family. | 0.402 |