STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_03177Glycosyl hydrolase. (691 aa)    
Predicted Functional Partners:
VDBG_08006
N-acetyltransferase domain-containing protein.
     
 0.907
VDBG_02434
Alpha-galactosidase.
   
 
 0.904
VDBG_06077
Alpha-galactosidase.
   
 
 0.904
VDBG_07493
Alpha-galactosidase.
   
 
 0.904
VDBG_07651
Alpha-galactosidase.
   
 
 0.904
VDBG_09523
Alpha-galactosidase.
   
 
 0.904
VDBG_04943
Chitooligosaccharidolytic beta-N-acetylglucosaminidase.
     
  0.900
VDBG_05826
Alpha-galactosidase; Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Belongs to the glycosyl hydrolase.
     
  0.900
VDBG_03258
Oviduct-specific glycoprotein; Belongs to the glycosyl hydrolase 18 family.
    
 0.739
VDBG_03556
Endochitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.739
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.