STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_038671-phosphatidylinositol-3-phosphate 5-kinase FAB1. (2419 aa)    
Predicted Functional Partners:
VDBG_08222
Polyphosphoinositide phosphatase.
    
 0.999
VDBG_09689
Vacuole morphology and inheritance protein.
    
 0.989
VDBG_01674
Phosphatidylinositol 3-kinase VPS34; Belongs to the PI3/PI4-kinase family.
  
  
 0.965
VDBG_06813
Phosphatidylinositol 4-kinase PIK1; Belongs to the PI3/PI4-kinase family.
     
 0.949
VDBG_05143
Phosphatidylinositol 4-kinase STT4; Belongs to the PI3/PI4-kinase family.
     
 0.946
VDBG_04391
Phosphatidylinositol 4-kinase LSB6.
     
 0.940
VDBG_08718
Myotubularin.
     
 0.934
VDBG_07242
Syja_N domain-containing protein.
    
 0.918
VDBG_05364
CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.910
VDBG_01659
Phosphoinositide phospholipase C.
     
  0.900
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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