STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_04041Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (890 aa)    
Predicted Functional Partners:
VDBG_07798
Cell cycle control protein cwf8.
    
   0.839
VDBG_06739
ADP-ribosylation factor family protein.
     
 0.588
VDBG_05048
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.579
VDBG_09349
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.509
VDBG_04827
ADP-ribosylation factor.
    
 0.508
VDBG_09354
AP-1 complex subunit gamma.
    
  0.503
VDBG_02172
IPPc domain-containing protein.
    
 0.478
VDBG_05964
Synaptojanin-1.
    
0.478
VDBG_01984
SLA2.
     
 0.470
VDBG_08265
Adaptin ear-binding coat-associated protein.
    
  0.448
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.