Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00146 | VDBG_00841 | C9S8W2 | C9S7H1 | Sec8 exocyst complex component specific domain-containing protein. | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.999 |
VDBG_00146 | VDBG_00926 | C9S8W2 | C9S7T2 | Sec8 exocyst complex component specific domain-containing protein. | Exocyst complex component EXO84. | 0.999 |
VDBG_00146 | VDBG_01505 | C9S8W2 | C9SAB9 | Sec8 exocyst complex component specific domain-containing protein. | Uncharacterized protein. | 0.999 |
VDBG_00146 | VDBG_01611 | C9S8W2 | C9SAS8 | Sec8 exocyst complex component specific domain-containing protein. | GTP-binding protein SAS1. | 0.835 |
VDBG_00146 | VDBG_01935 | C9S8W2 | C9SBU2 | Sec8 exocyst complex component specific domain-containing protein. | Sec2p domain-containing protein. | 0.824 |
VDBG_00146 | VDBG_03653 | C9S8W2 | C9SGP9 | Sec8 exocyst complex component specific domain-containing protein. | GTP-binding protein ypt3. | 0.873 |
VDBG_00146 | VDBG_04179 | C9S8W2 | C9SG56 | Sec8 exocyst complex component specific domain-containing protein. | Uncharacterized protein. | 0.901 |
VDBG_00146 | VDBG_04323 | C9S8W2 | C9SJ52 | Sec8 exocyst complex component specific domain-containing protein. | Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. | 0.999 |
VDBG_00146 | VDBG_06951 | C9S8W2 | C9SR39 | Sec8 exocyst complex component specific domain-containing protein. | Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.999 |
VDBG_00146 | VDBG_07927 | C9S8W2 | C9SSQ2 | Sec8 exocyst complex component specific domain-containing protein. | Sec3-PIP2_bind domain-containing protein. | 0.999 |
VDBG_00841 | VDBG_00146 | C9S7H1 | C9S8W2 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Sec8 exocyst complex component specific domain-containing protein. | 0.999 |
VDBG_00841 | VDBG_00926 | C9S7H1 | C9S7T2 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Exocyst complex component EXO84. | 0.999 |
VDBG_00841 | VDBG_01505 | C9S7H1 | C9SAB9 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Uncharacterized protein. | 0.999 |
VDBG_00841 | VDBG_01611 | C9S7H1 | C9SAS8 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | GTP-binding protein SAS1. | 0.815 |
VDBG_00841 | VDBG_01935 | C9S7H1 | C9SBU2 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Sec2p domain-containing protein. | 0.768 |
VDBG_00841 | VDBG_03653 | C9S7H1 | C9SGP9 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | GTP-binding protein ypt3. | 0.890 |
VDBG_00841 | VDBG_04179 | C9S7H1 | C9SG56 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Uncharacterized protein. | 0.901 |
VDBG_00841 | VDBG_04323 | C9S7H1 | C9SJ52 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. | 0.999 |
VDBG_00841 | VDBG_06951 | C9S7H1 | C9SR39 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.999 |
VDBG_00841 | VDBG_07927 | C9S7H1 | C9SSQ2 | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | Sec3-PIP2_bind domain-containing protein. | 0.999 |
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