STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_03576Alcohol dehydrogenase zinc-binding domain-containing protein. (294 aa)    
Predicted Functional Partners:
VDBG_06047
TOXD.
  
  
 0.518
VDBG_01283
TOXD.
  
     0.515
VDBG_02874
TOXD.
  
  
 0.513
VDBG_04611
TOXD.
  
     0.513
VDBG_01342
Alcohol dehydrogenase zinc-binding domain-containing protein.
  
     0.512
VDBG_01334
TOXD.
  
   
 0.472
VDBG_02467
Alcohol dehydrogenase.
  
     0.464
VDBG_01268
Quinone oxidoreductase.
  
  
 0.460
VDBG_03981
Zeta-crystallin.
  
     0.458
VDBG_06576
Oxidoreductase.
  
   
 0.448
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.