Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00127 | VDBG_00706 | C9S8U3 | C9S6Y7 | Predicted protein. | Phytoene synthase. | 0.487 |
VDBG_00127 | VDBG_04596 | C9S8U3 | C9SHR4 | Predicted protein. | Uncharacterized protein. | 0.430 |
VDBG_00127 | VDBG_05192 | C9S8U3 | C9SK65 | Predicted protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.651 |
VDBG_00127 | VDBG_07304 | C9S8U3 | C9SQR9 | Predicted protein. | Squalene synthetase. | 0.487 |
VDBG_00127 | VDBG_07735 | C9S8U3 | C9SS60 | Predicted protein. | Uncharacterized protein. | 0.445 |
VDBG_00127 | VDBG_10200 | C9S8U3 | C9SZ75 | Predicted protein. | rRNA biogenesis protein RRP5. | 0.606 |
VDBG_00706 | VDBG_00127 | C9S6Y7 | C9S8U3 | Phytoene synthase. | Predicted protein. | 0.487 |
VDBG_00706 | VDBG_04596 | C9S6Y7 | C9SHR4 | Phytoene synthase. | Uncharacterized protein. | 0.458 |
VDBG_00706 | VDBG_05192 | C9S6Y7 | C9SK65 | Phytoene synthase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.705 |
VDBG_00706 | VDBG_06681 | C9S6Y7 | C9SP56 | Phytoene synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.585 |
VDBG_00706 | VDBG_10200 | C9S6Y7 | C9SZ75 | Phytoene synthase. | rRNA biogenesis protein RRP5. | 0.497 |
VDBG_03347 | VDBG_04596 | C9SDZ1 | C9SHR4 | tRNA (Guanine-N(1)-)-methyltransferase. | Uncharacterized protein. | 0.545 |
VDBG_03347 | VDBG_09892 | C9SDZ1 | C9SYB7 | tRNA (Guanine-N(1)-)-methyltransferase. | 3-hydroxyacyl-CoA dehydrogenase type-2. | 0.814 |
VDBG_03347 | VDBG_10037 | C9SDZ1 | C9SYR2 | tRNA (Guanine-N(1)-)-methyltransferase. | 3-hydroxyacyl-CoA dehydrogenase type-2. | 0.814 |
VDBG_04596 | VDBG_00127 | C9SHR4 | C9S8U3 | Uncharacterized protein. | Predicted protein. | 0.430 |
VDBG_04596 | VDBG_00706 | C9SHR4 | C9S6Y7 | Uncharacterized protein. | Phytoene synthase. | 0.458 |
VDBG_04596 | VDBG_03347 | C9SHR4 | C9SDZ1 | Uncharacterized protein. | tRNA (Guanine-N(1)-)-methyltransferase. | 0.545 |
VDBG_04596 | VDBG_05192 | C9SHR4 | C9SK65 | Uncharacterized protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.486 |
VDBG_04596 | VDBG_06681 | C9SHR4 | C9SP56 | Uncharacterized protein. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.650 |
VDBG_04596 | VDBG_07304 | C9SHR4 | C9SQR9 | Uncharacterized protein. | Squalene synthetase. | 0.458 |
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