Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01969 | VDBG_04618 | C9SBX6 | C9SHT6 | DNA polymerase IV. | MUS42. | 0.944 |
VDBG_01969 | VDBG_04619 | C9SBX6 | C9SHT7 | DNA polymerase IV. | DNA polymerase IV. | 0.953 |
VDBG_01969 | VDBG_04676 | C9SBX6 | C9SHZ4 | DNA polymerase IV. | Uncharacterized protein. | 0.512 |
VDBG_03554 | VDBG_04676 | C9SGA5 | C9SHZ4 | Endoglucanase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Uncharacterized protein. | 0.452 |
VDBG_04618 | VDBG_01969 | C9SHT6 | C9SBX6 | MUS42. | DNA polymerase IV. | 0.944 |
VDBG_04618 | VDBG_04619 | C9SHT6 | C9SHT7 | MUS42. | DNA polymerase IV. | 0.900 |
VDBG_04618 | VDBG_04676 | C9SHT6 | C9SHZ4 | MUS42. | Uncharacterized protein. | 0.500 |
VDBG_04619 | VDBG_01969 | C9SHT7 | C9SBX6 | DNA polymerase IV. | DNA polymerase IV. | 0.953 |
VDBG_04619 | VDBG_04618 | C9SHT7 | C9SHT6 | DNA polymerase IV. | MUS42. | 0.900 |
VDBG_04619 | VDBG_04676 | C9SHT7 | C9SHZ4 | DNA polymerase IV. | Uncharacterized protein. | 0.432 |
VDBG_04676 | VDBG_01969 | C9SHZ4 | C9SBX6 | Uncharacterized protein. | DNA polymerase IV. | 0.512 |
VDBG_04676 | VDBG_03554 | C9SHZ4 | C9SGA5 | Uncharacterized protein. | Endoglucanase B; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.452 |
VDBG_04676 | VDBG_04618 | C9SHZ4 | C9SHT6 | Uncharacterized protein. | MUS42. | 0.500 |
VDBG_04676 | VDBG_04619 | C9SHZ4 | C9SHT7 | Uncharacterized protein. | DNA polymerase IV. | 0.432 |
VDBG_04676 | VDBG_05810 | C9SHZ4 | C9SJT7 | Uncharacterized protein. | DUF544 domain-containing protein. | 0.452 |
VDBG_05810 | VDBG_04676 | C9SJT7 | C9SHZ4 | DUF544 domain-containing protein. | Uncharacterized protein. | 0.452 |