Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00328 | VDBG_04686 | C9S5E9 | C9SI04 | Non-specific serine/threonine protein kinase. | Cutinase G-box binding protein. | 0.467 |
VDBG_03345 | VDBG_04396 | C9SDY9 | C9SJC5 | Transcription factor prr1. | Mitogen-activated protein kinase. | 0.938 |
VDBG_03345 | VDBG_04686 | C9SDY9 | C9SI04 | Transcription factor prr1. | Cutinase G-box binding protein. | 0.550 |
VDBG_03345 | VDBG_05375 | C9SDY9 | C9SKP8 | Transcription factor prr1. | Heat shock factor protein. | 0.654 |
VDBG_04396 | VDBG_03345 | C9SJC5 | C9SDY9 | Mitogen-activated protein kinase. | Transcription factor prr1. | 0.938 |
VDBG_04396 | VDBG_04686 | C9SJC5 | C9SI04 | Mitogen-activated protein kinase. | Cutinase G-box binding protein. | 0.544 |
VDBG_04396 | VDBG_05375 | C9SJC5 | C9SKP8 | Mitogen-activated protein kinase. | Heat shock factor protein. | 0.755 |
VDBG_04686 | VDBG_00328 | C9SI04 | C9S5E9 | Cutinase G-box binding protein. | Non-specific serine/threonine protein kinase. | 0.467 |
VDBG_04686 | VDBG_03345 | C9SI04 | C9SDY9 | Cutinase G-box binding protein. | Transcription factor prr1. | 0.550 |
VDBG_04686 | VDBG_04396 | C9SI04 | C9SJC5 | Cutinase G-box binding protein. | Mitogen-activated protein kinase. | 0.544 |
VDBG_04686 | VDBG_05375 | C9SI04 | C9SKP8 | Cutinase G-box binding protein. | Heat shock factor protein. | 0.482 |
VDBG_04686 | VDBG_05536 | C9SI04 | C9SL59 | Cutinase G-box binding protein. | DNA damage-responsive transcriptional repressor RPH1. | 0.638 |
VDBG_04686 | VDBG_06063 | C9SI04 | C9SMD9 | Cutinase G-box binding protein. | Serine/threonine-protein kinase ppk18. | 0.913 |
VDBG_05375 | VDBG_03345 | C9SKP8 | C9SDY9 | Heat shock factor protein. | Transcription factor prr1. | 0.654 |
VDBG_05375 | VDBG_04396 | C9SKP8 | C9SJC5 | Heat shock factor protein. | Mitogen-activated protein kinase. | 0.755 |
VDBG_05375 | VDBG_04686 | C9SKP8 | C9SI04 | Heat shock factor protein. | Cutinase G-box binding protein. | 0.482 |
VDBG_05536 | VDBG_04686 | C9SL59 | C9SI04 | DNA damage-responsive transcriptional repressor RPH1. | Cutinase G-box binding protein. | 0.638 |
VDBG_05536 | VDBG_06063 | C9SL59 | C9SMD9 | DNA damage-responsive transcriptional repressor RPH1. | Serine/threonine-protein kinase ppk18. | 0.450 |
VDBG_06063 | VDBG_04686 | C9SMD9 | C9SI04 | Serine/threonine-protein kinase ppk18. | Cutinase G-box binding protein. | 0.913 |
VDBG_06063 | VDBG_05536 | C9SMD9 | C9SL59 | Serine/threonine-protein kinase ppk18. | DNA damage-responsive transcriptional repressor RPH1. | 0.450 |