Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00303 | VDBG_04698 | C9S596 | C9SI16 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.600 |
VDBG_00303 | VDBG_08639 | C9S596 | C9SUR4 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein. | 0.979 |
VDBG_00656 | VDBG_04698 | C9S6Q7 | C9SI16 | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.857 |
VDBG_00656 | VDBG_08639 | C9S6Q7 | C9SUR4 | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein. | 0.887 |
VDBG_04698 | VDBG_00303 | C9SI16 | C9S596 | Uncharacterized protein. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.600 |
VDBG_04698 | VDBG_00656 | C9SI16 | C9S6Q7 | Uncharacterized protein. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.857 |
VDBG_04698 | VDBG_07901 | C9SI16 | C9SSM6 | Uncharacterized protein. | Potassium channel; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. | 0.499 |
VDBG_04698 | VDBG_08639 | C9SI16 | C9SUR4 | Uncharacterized protein. | RING-box protein. | 0.491 |
VDBG_04698 | VDBG_09193 | C9SI16 | C9SWB8 | Uncharacterized protein. | Uncharacterized protein. | 0.413 |
VDBG_04698 | VDBG_09427 | C9SI16 | C9SXC7 | Uncharacterized protein. | Endosome protein. | 0.509 |
VDBG_07901 | VDBG_04698 | C9SSM6 | C9SI16 | Potassium channel; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. | Uncharacterized protein. | 0.499 |
VDBG_08639 | VDBG_00303 | C9SUR4 | C9S596 | RING-box protein. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.979 |
VDBG_08639 | VDBG_00656 | C9SUR4 | C9S6Q7 | RING-box protein. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.887 |
VDBG_08639 | VDBG_04698 | C9SUR4 | C9SI16 | RING-box protein. | Uncharacterized protein. | 0.491 |
VDBG_09193 | VDBG_04698 | C9SWB8 | C9SI16 | Uncharacterized protein. | Uncharacterized protein. | 0.413 |
VDBG_09427 | VDBG_04698 | C9SXC7 | C9SI16 | Endosome protein. | Uncharacterized protein. | 0.509 |