Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01082 | VDBG_01446 | C9S900 | C9S887 | DNA-directed RNA polymerases I. | Metallothionein-I gene transcription activator. | 0.999 |
VDBG_01082 | VDBG_01503 | C9S900 | C9SAB7 | DNA-directed RNA polymerases I. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
VDBG_01082 | VDBG_01644 | C9S900 | C9SAW1 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
VDBG_01082 | VDBG_02128 | C9S900 | C9S9F6 | DNA-directed RNA polymerases I. | DNA-dependent RNA polymerase I subunit A43. | 0.999 |
VDBG_01082 | VDBG_03424 | C9S900 | C9SE91 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
VDBG_01082 | VDBG_03482 | C9S900 | C9SFW9 | DNA-directed RNA polymerases I. | Uncharacterized protein. | 0.999 |
VDBG_01082 | VDBG_03761 | C9S900 | C9SH58 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerases I/II/III subunit 10. | 0.999 |
VDBG_01082 | VDBG_04700 | C9S900 | C9SI18 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.999 |
VDBG_01082 | VDBG_05228 | C9S900 | C9SKA1 | DNA-directed RNA polymerases I. | RPOL4c domain-containing protein. | 0.999 |
VDBG_01082 | VDBG_05325 | C9S900 | C9SKJ8 | DNA-directed RNA polymerases I. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
VDBG_01446 | VDBG_01082 | C9S887 | C9S900 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerases I. | 0.999 |
VDBG_01446 | VDBG_01503 | C9S887 | C9SAB7 | Metallothionein-I gene transcription activator. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
VDBG_01446 | VDBG_01644 | C9S887 | C9SAW1 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.998 |
VDBG_01446 | VDBG_02128 | C9S887 | C9S9F6 | Metallothionein-I gene transcription activator. | DNA-dependent RNA polymerase I subunit A43. | 0.999 |
VDBG_01446 | VDBG_03424 | C9S887 | C9SE91 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
VDBG_01446 | VDBG_03482 | C9S887 | C9SFW9 | Metallothionein-I gene transcription activator. | Uncharacterized protein. | 0.994 |
VDBG_01446 | VDBG_03761 | C9S887 | C9SH58 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerases I/II/III subunit 10. | 0.999 |
VDBG_01446 | VDBG_04700 | C9S887 | C9SI18 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.999 |
VDBG_01446 | VDBG_05228 | C9S887 | C9SKA1 | Metallothionein-I gene transcription activator. | RPOL4c domain-containing protein. | 0.992 |
VDBG_01446 | VDBG_05325 | C9S887 | C9SKJ8 | Metallothionein-I gene transcription activator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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