STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_04387Proteasome subunit alpha type. (243 aa)    
Predicted Functional Partners:
VDBG_00502
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
0.999
VDBG_01411
26S protease regulatory subunit 6A-B.
  
 0.999
VDBG_00101
Proteasome subunit alpha type.
  
0.999
VDBG_02265
26S proteasome regulatory subunit RPN5.
   
 0.999
VDBG_02450
Proteasome component PRE3.
   
 0.999
VDBG_02830
Proteasome endopeptidase complex.
  
0.999
VDBG_03999
26S proteasome regulatory subunit rpn-8.
   
 0.999
VDBG_04152
Proteasome subunit beta.
   
 0.999
VDBG_04714
Proteasome component PUP1.
   
 0.999
VDBG_04729
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
  
 0.999
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.