Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01032 | VDBG_02290 | C9S8E4 | C9S9W8 | PDZ domain-containing protein. | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | 0.573 |
VDBG_01032 | VDBG_04468 | C9S8E4 | C9SJJ7 | PDZ domain-containing protein. | Metacaspase-1. | 0.428 |
VDBG_01032 | VDBG_08788 | C9S8E4 | C9SV63 | PDZ domain-containing protein. | Mitochondrial nuclease. | 0.532 |
VDBG_01032 | VDBG_09732 | C9S8E4 | C9SXV7 | PDZ domain-containing protein. | Uncharacterized protein. | 0.428 |
VDBG_02290 | VDBG_01032 | C9S9W8 | C9S8E4 | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | PDZ domain-containing protein. | 0.573 |
VDBG_02290 | VDBG_04468 | C9S9W8 | C9SJJ7 | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | Metacaspase-1. | 0.429 |
VDBG_02290 | VDBG_09732 | C9S9W8 | C9SXV7 | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | Uncharacterized protein. | 0.429 |
VDBG_04468 | VDBG_01032 | C9SJJ7 | C9S8E4 | Metacaspase-1. | PDZ domain-containing protein. | 0.428 |
VDBG_04468 | VDBG_02290 | C9SJJ7 | C9S9W8 | Metacaspase-1. | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | 0.429 |
VDBG_04468 | VDBG_08788 | C9SJJ7 | C9SV63 | Metacaspase-1. | Mitochondrial nuclease. | 0.446 |
VDBG_04468 | VDBG_09732 | C9SJJ7 | C9SXV7 | Metacaspase-1. | Uncharacterized protein. | 0.921 |
VDBG_08788 | VDBG_01032 | C9SV63 | C9S8E4 | Mitochondrial nuclease. | PDZ domain-containing protein. | 0.532 |
VDBG_08788 | VDBG_04468 | C9SV63 | C9SJJ7 | Mitochondrial nuclease. | Metacaspase-1. | 0.446 |
VDBG_08788 | VDBG_09732 | C9SV63 | C9SXV7 | Mitochondrial nuclease. | Uncharacterized protein. | 0.446 |
VDBG_09732 | VDBG_01032 | C9SXV7 | C9S8E4 | Uncharacterized protein. | PDZ domain-containing protein. | 0.428 |
VDBG_09732 | VDBG_02290 | C9SXV7 | C9S9W8 | Uncharacterized protein. | Transmembrane BAX inhibitor motif-containing protein; Belongs to the BI1 family. | 0.429 |
VDBG_09732 | VDBG_04468 | C9SXV7 | C9SJJ7 | Uncharacterized protein. | Metacaspase-1. | 0.921 |
VDBG_09732 | VDBG_08788 | C9SXV7 | C9SV63 | Uncharacterized protein. | Mitochondrial nuclease. | 0.446 |