Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00232 | VDBG_01631 | C9S977 | C9SAU8 | 3-hydroxybutyryl-CoA dehydrogenase. | Methylcrotonoyl-CoA carboxylase beta chain. | 0.629 |
VDBG_00232 | VDBG_03104 | C9S977 | C9SD30 | 3-hydroxybutyryl-CoA dehydrogenase. | Mitochondrial methylglutaconyl-CoA hydratase. | 0.512 |
VDBG_00232 | VDBG_03737 | C9S977 | C9SH34 | 3-hydroxybutyryl-CoA dehydrogenase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.980 |
VDBG_00232 | VDBG_04331 | C9S977 | C9SJ60 | 3-hydroxybutyryl-CoA dehydrogenase. | Electron transfer flavoprotein subunit alpha. | 0.685 |
VDBG_00232 | VDBG_04354 | C9S977 | C9SJ83 | 3-hydroxybutyryl-CoA dehydrogenase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.979 |
VDBG_00232 | VDBG_05604 | C9S977 | C9SLC7 | 3-hydroxybutyryl-CoA dehydrogenase. | Non-specific lipid-transfer protein. | 0.830 |
VDBG_00232 | VDBG_05803 | C9S977 | C9SJT0 | 3-hydroxybutyryl-CoA dehydrogenase. | Fungal_trans domain-containing protein. | 0.618 |
VDBG_00232 | VDBG_06897 | C9S977 | C9SPS2 | 3-hydroxybutyryl-CoA dehydrogenase. | Uncharacterized protein. | 0.486 |
VDBG_00232 | VDBG_07520 | C9S977 | C9SRJ5 | 3-hydroxybutyryl-CoA dehydrogenase. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.457 |
VDBG_01631 | VDBG_00232 | C9SAU8 | C9S977 | Methylcrotonoyl-CoA carboxylase beta chain. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.629 |
VDBG_01631 | VDBG_03104 | C9SAU8 | C9SD30 | Methylcrotonoyl-CoA carboxylase beta chain. | Mitochondrial methylglutaconyl-CoA hydratase. | 0.819 |
VDBG_01631 | VDBG_03737 | C9SAU8 | C9SH34 | Methylcrotonoyl-CoA carboxylase beta chain. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.569 |
VDBG_01631 | VDBG_04331 | C9SAU8 | C9SJ60 | Methylcrotonoyl-CoA carboxylase beta chain. | Electron transfer flavoprotein subunit alpha. | 0.641 |
VDBG_01631 | VDBG_04354 | C9SAU8 | C9SJ83 | Methylcrotonoyl-CoA carboxylase beta chain. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.569 |
VDBG_01631 | VDBG_05604 | C9SAU8 | C9SLC7 | Methylcrotonoyl-CoA carboxylase beta chain. | Non-specific lipid-transfer protein. | 0.408 |
VDBG_01631 | VDBG_05803 | C9SAU8 | C9SJT0 | Methylcrotonoyl-CoA carboxylase beta chain. | Fungal_trans domain-containing protein. | 0.565 |
VDBG_01631 | VDBG_06897 | C9SAU8 | C9SPS2 | Methylcrotonoyl-CoA carboxylase beta chain. | Uncharacterized protein. | 0.540 |
VDBG_01631 | VDBG_07520 | C9SAU8 | C9SRJ5 | Methylcrotonoyl-CoA carboxylase beta chain. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.540 |
VDBG_01631 | VDBG_09064 | C9SAU8 | C9SVY9 | Methylcrotonoyl-CoA carboxylase beta chain. | Uncharacterized protein. | 0.629 |
VDBG_03104 | VDBG_00232 | C9SD30 | C9S977 | Mitochondrial methylglutaconyl-CoA hydratase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.512 |
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