STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_05803Fungal_trans domain-containing protein. (690 aa)    
Predicted Functional Partners:
VDBG_04331
Electron transfer flavoprotein subunit alpha.
  
 0.747
VDBG_05604
Non-specific lipid-transfer protein.
  
 0.628
VDBG_00232
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.618
VDBG_09064
Uncharacterized protein.
  
 0.618
VDBG_07520
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.595
VDBG_01631
Methylcrotonoyl-CoA carboxylase beta chain.
  
 
 0.565
VDBG_03104
Mitochondrial methylglutaconyl-CoA hydratase.
  
 0.561
VDBG_03737
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.549
VDBG_04354
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.549
VDBG_06897
Uncharacterized protein.
  
 0.547
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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