Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00688 | VDBG_05810 | C9S6W9 | C9SJT7 | SET domain-containing protein. | DUF544 domain-containing protein. | 0.452 |
VDBG_00751 | VDBG_05210 | C9S758 | C9SK83 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.888 |
VDBG_00751 | VDBG_05810 | C9S758 | C9SJT7 | Uncharacterized protein. | DUF544 domain-containing protein. | 0.473 |
VDBG_00751 | VDBG_08022 | C9S758 | C9SSZ7 | Uncharacterized protein. | Ubiquitin. | 0.888 |
VDBG_00752 | VDBG_05210 | C9S759 | C9SK83 | 60S ribosomal protein L40. | Ubiquitin-like domain-containing protein. | 0.888 |
VDBG_00752 | VDBG_05810 | C9S759 | C9SJT7 | 60S ribosomal protein L40. | DUF544 domain-containing protein. | 0.473 |
VDBG_00752 | VDBG_08022 | C9S759 | C9SSZ7 | 60S ribosomal protein L40. | Ubiquitin. | 0.890 |
VDBG_02029 | VDBG_02867 | C9SC36 | C9SCE3 | SET domain-containing protein. | SET domain-containing protein. | 0.503 |
VDBG_02029 | VDBG_05810 | C9SC36 | C9SJT7 | SET domain-containing protein. | DUF544 domain-containing protein. | 0.452 |
VDBG_02867 | VDBG_02029 | C9SCE3 | C9SC36 | SET domain-containing protein. | SET domain-containing protein. | 0.503 |
VDBG_02867 | VDBG_05810 | C9SCE3 | C9SJT7 | SET domain-containing protein. | DUF544 domain-containing protein. | 0.452 |
VDBG_04676 | VDBG_05810 | C9SHZ4 | C9SJT7 | Uncharacterized protein. | DUF544 domain-containing protein. | 0.452 |
VDBG_05210 | VDBG_00751 | C9SK83 | C9S758 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.888 |
VDBG_05210 | VDBG_00752 | C9SK83 | C9S759 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L40. | 0.888 |
VDBG_05210 | VDBG_05810 | C9SK83 | C9SJT7 | Ubiquitin-like domain-containing protein. | DUF544 domain-containing protein. | 0.422 |
VDBG_05810 | VDBG_00688 | C9SJT7 | C9S6W9 | DUF544 domain-containing protein. | SET domain-containing protein. | 0.452 |
VDBG_05810 | VDBG_00751 | C9SJT7 | C9S758 | DUF544 domain-containing protein. | Uncharacterized protein. | 0.473 |
VDBG_05810 | VDBG_00752 | C9SJT7 | C9S759 | DUF544 domain-containing protein. | 60S ribosomal protein L40. | 0.473 |
VDBG_05810 | VDBG_02029 | C9SJT7 | C9SC36 | DUF544 domain-containing protein. | SET domain-containing protein. | 0.452 |
VDBG_05810 | VDBG_02867 | C9SJT7 | C9SCE3 | DUF544 domain-containing protein. | SET domain-containing protein. | 0.452 |
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