Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_02072 | VDBG_03977 | C9SC79 | C9SF82 | D-lactate dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.927 |
VDBG_02072 | VDBG_04204 | C9SC79 | C9SG81 | D-lactate dehydrogenase. | Cytochrome b2. | 0.923 |
VDBG_02072 | VDBG_05024 | C9SC79 | C9SIZ2 | D-lactate dehydrogenase. | Pyruvate carboxylase. | 0.904 |
VDBG_02072 | VDBG_05150 | C9SC79 | C9SK23 | D-lactate dehydrogenase. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.923 |
VDBG_02072 | VDBG_07230 | C9SC79 | C9SQJ5 | D-lactate dehydrogenase. | D-lactate dehydrogenase. | 0.904 |
VDBG_02072 | VDBG_09035 | C9SC79 | C9SVW0 | D-lactate dehydrogenase. | D-lactate dehydrogenase. | 0.906 |
VDBG_02072 | VDBG_09108 | C9SC79 | C9SW33 | D-lactate dehydrogenase. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.923 |
VDBG_02072 | VDBG_09981 | C9SC79 | C9SYK6 | D-lactate dehydrogenase. | Malic enzyme. | 0.906 |
VDBG_02377 | VDBG_03977 | C9SA55 | C9SF82 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.932 |
VDBG_02377 | VDBG_04204 | C9SA55 | C9SG81 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cytochrome b2. | 0.914 |
VDBG_02377 | VDBG_05024 | C9SA55 | C9SIZ2 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate carboxylase. | 0.909 |
VDBG_02377 | VDBG_05150 | C9SA55 | C9SK23 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.912 |
VDBG_02377 | VDBG_09108 | C9SA55 | C9SW33 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.914 |
VDBG_02377 | VDBG_09981 | C9SA55 | C9SYK6 | D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Malic enzyme. | 0.902 |
VDBG_02828 | VDBG_04204 | C9SCA4 | C9SG81 | D-lactate dehydrogenase. | Cytochrome b2. | 0.931 |
VDBG_02828 | VDBG_05024 | C9SCA4 | C9SIZ2 | D-lactate dehydrogenase. | Pyruvate carboxylase. | 0.900 |
VDBG_02828 | VDBG_05150 | C9SCA4 | C9SK23 | D-lactate dehydrogenase. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.931 |
VDBG_02828 | VDBG_09108 | C9SCA4 | C9SW33 | D-lactate dehydrogenase. | Cytochrome b2; Belongs to the cytochrome b5 family. | 0.931 |
VDBG_02828 | VDBG_09981 | C9SCA4 | C9SYK6 | D-lactate dehydrogenase. | Malic enzyme. | 0.906 |
VDBG_03977 | VDBG_02072 | C9SF82 | C9SC79 | Pyruvate kinase; Belongs to the pyruvate kinase family. | D-lactate dehydrogenase. | 0.927 |
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