STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_05194Predicted protein. (495 aa)    
Predicted Functional Partners:
VDBG_00014
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.707
VDBG_03653
GTP-binding protein ypt3.
   
 0.688
VDBG_00365
Spindle pole body component.
    
 
 0.656
VDBG_01723
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.650
VDBG_04388
Spindle pole body component.
    
 
 0.650
VDBG_05979
Serine/threonine-protein kinase plo1.
   
 0.647
VDBG_08950
Spindle pole body component alp14.
   
 0.619
VDBG_03768
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.593
VDBG_06071
Cytoplasmic dynein 1 intermediate chain 1.
     
 0.578
VDBG_00910
Dynein heavy chain.
    
 0.576
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.