Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00380 | VDBG_05401 | C9S5P7 | C9SKS4 | AtfA. | Glucose repression mediator protein CYC8. | 0.932 |
VDBG_00380 | VDBG_08650 | C9S5P7 | C9SUS5 | AtfA. | Transcriptional repressor rco-1. | 0.407 |
VDBG_03426 | VDBG_04978 | C9SE93 | C9SIU6 | Histone H3. | Uncharacterized protein. | 0.880 |
VDBG_03426 | VDBG_05401 | C9SE93 | C9SKS4 | Histone H3. | Glucose repression mediator protein CYC8. | 0.639 |
VDBG_03426 | VDBG_06018 | C9SE93 | C9SM94 | Histone H3. | Will die slowly. | 0.900 |
VDBG_03426 | VDBG_07405 | C9SE93 | C9SR20 | Histone H3. | Set1 complex component swd1. | 0.977 |
VDBG_03426 | VDBG_08650 | C9SE93 | C9SUS5 | Histone H3. | Transcriptional repressor rco-1. | 0.880 |
VDBG_04584 | VDBG_05401 | C9SHQ2 | C9SKS4 | Forkhead-associated domain-containing protein kinase. | Glucose repression mediator protein CYC8. | 0.910 |
VDBG_04978 | VDBG_03426 | C9SIU6 | C9SE93 | Uncharacterized protein. | Histone H3. | 0.880 |
VDBG_04978 | VDBG_05401 | C9SIU6 | C9SKS4 | Uncharacterized protein. | Glucose repression mediator protein CYC8. | 0.695 |
VDBG_04978 | VDBG_07405 | C9SIU6 | C9SR20 | Uncharacterized protein. | Set1 complex component swd1. | 0.902 |
VDBG_05400 | VDBG_05401 | C9SKS3 | C9SKS4 | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | Glucose repression mediator protein CYC8. | 0.854 |
VDBG_05401 | VDBG_00380 | C9SKS4 | C9S5P7 | Glucose repression mediator protein CYC8. | AtfA. | 0.932 |
VDBG_05401 | VDBG_03426 | C9SKS4 | C9SE93 | Glucose repression mediator protein CYC8. | Histone H3. | 0.639 |
VDBG_05401 | VDBG_04584 | C9SKS4 | C9SHQ2 | Glucose repression mediator protein CYC8. | Forkhead-associated domain-containing protein kinase. | 0.910 |
VDBG_05401 | VDBG_04978 | C9SKS4 | C9SIU6 | Glucose repression mediator protein CYC8. | Uncharacterized protein. | 0.695 |
VDBG_05401 | VDBG_05400 | C9SKS4 | C9SKS3 | Glucose repression mediator protein CYC8. | 60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.854 |
VDBG_05401 | VDBG_06018 | C9SKS4 | C9SM94 | Glucose repression mediator protein CYC8. | Will die slowly. | 0.833 |
VDBG_05401 | VDBG_07405 | C9SKS4 | C9SR20 | Glucose repression mediator protein CYC8. | Set1 complex component swd1. | 0.665 |
VDBG_05401 | VDBG_08650 | C9SKS4 | C9SUS5 | Glucose repression mediator protein CYC8. | Transcriptional repressor rco-1. | 0.951 |
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