Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00052 | VDBG_00140 | C9S8I4 | C9S8V6 | DNA polymerase. | 3'-5' exonuclease domain-containing protein. | 0.987 |
VDBG_00052 | VDBG_01980 | C9S8I4 | C9SBY7 | DNA polymerase. | DNA polymerase. | 0.727 |
VDBG_00052 | VDBG_03087 | C9S8I4 | C9SD13 | DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.962 |
VDBG_00052 | VDBG_03362 | C9S8I4 | C9SE06 | DNA polymerase. | DNA polymerase subunit delta-2. | 0.999 |
VDBG_00052 | VDBG_05542 | C9S8I4 | C9SL65 | DNA polymerase. | Uncharacterized protein. | 0.979 |
VDBG_00052 | VDBG_07007 | C9S8I4 | C9SR95 | DNA polymerase. | Uncharacterized protein. | 0.845 |
VDBG_00052 | VDBG_07009 | C9S8I4 | C9SPX4 | DNA polymerase. | DNA polymerase. | 0.846 |
VDBG_00052 | VDBG_07512 | C9S8I4 | C9SRI7 | DNA polymerase. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.983 |
VDBG_00052 | VDBG_09397 | C9S8I4 | C9SX97 | DNA polymerase. | DNA primase large subunit. | 0.983 |
VDBG_00140 | VDBG_00052 | C9S8V6 | C9S8I4 | 3'-5' exonuclease domain-containing protein. | DNA polymerase. | 0.987 |
VDBG_00140 | VDBG_01980 | C9S8V6 | C9SBY7 | 3'-5' exonuclease domain-containing protein. | DNA polymerase. | 0.839 |
VDBG_00140 | VDBG_03087 | C9S8V6 | C9SD13 | 3'-5' exonuclease domain-containing protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.987 |
VDBG_00140 | VDBG_03362 | C9S8V6 | C9SE06 | 3'-5' exonuclease domain-containing protein. | DNA polymerase subunit delta-2. | 0.973 |
VDBG_00140 | VDBG_05542 | C9S8V6 | C9SL65 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.619 |
VDBG_00140 | VDBG_07007 | C9S8V6 | C9SR95 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.810 |
VDBG_00140 | VDBG_07009 | C9S8V6 | C9SPX4 | 3'-5' exonuclease domain-containing protein. | DNA polymerase. | 0.810 |
VDBG_00140 | VDBG_09397 | C9S8V6 | C9SX97 | 3'-5' exonuclease domain-containing protein. | DNA primase large subunit. | 0.447 |
VDBG_01980 | VDBG_00052 | C9SBY7 | C9S8I4 | DNA polymerase. | DNA polymerase. | 0.727 |
VDBG_01980 | VDBG_00140 | C9SBY7 | C9S8V6 | DNA polymerase. | 3'-5' exonuclease domain-containing protein. | 0.839 |
VDBG_01980 | VDBG_03087 | C9SBY7 | C9SD13 | DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.857 |
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