STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_05561CRO1 protein. (706 aa)    
Predicted Functional Partners:
VDBG_01652
Myosin-9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.856
VDBG_07170
Myosin-5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
  
 
 0.835
VDBG_00014
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.771
VDBG_00900
Uncharacterized protein.
   
 
 0.646
VDBG_09407
Heat shock protein.
   
 
 0.646
VDBG_09408
Flavin_Reduct domain-containing protein.
   
 
 0.646
VDBG_05796
Ubiquitin conjugation factor E4.
    
 
 0.633
VDBG_06385
Predicted protein.
   
 
 0.563
VDBG_06485
BZIP transcription factor HapX.
   
 
 0.563
VDBG_00475
Uncharacterized protein.
    
 
 0.421
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.