STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_06455Cytochrome P450 1A2; Belongs to the cytochrome P450 family. (487 aa)    
Predicted Functional Partners:
VDBG_00140
3'-5' exonuclease domain-containing protein.
    
 0.505
VDBG_03438
Cytochrome P450 52A6; Belongs to the cytochrome P450 family.
  
 0.501
VDBG_06521
Isotrichodermin C-15 hydroxylase; Belongs to the cytochrome P450 family.
  
 0.480
VDBG_03026
Cytochrome P450 52E1; Belongs to the cytochrome P450 family.
  
 0.465
VDBG_04465
Cytochrome P450 2D20.
  
 0.464
VDBG_06661
Pisatin demethylase; Belongs to the cytochrome P450 family.
  
 0.460
VDBG_02397
Cytochrome P450 3A1; Belongs to the cytochrome P450 family.
  
 0.455
VDBG_04942
Cytochrome P450 52A11; Belongs to the cytochrome P450 family.
  
 0.451
VDBG_01360
Benzoate 4-monooxygenase; Belongs to the cytochrome P450 family.
  
 0.447
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.