Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VDBG_00140 | VDBG_01666 | C9S8V6 | C9SAY3 | 3'-5' exonuclease domain-containing protein. | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 0.998 |
| VDBG_00140 | VDBG_04420 | C9S8V6 | C9SJE9 | 3'-5' exonuclease domain-containing protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.998 |
| VDBG_00140 | VDBG_05694 | C9S8V6 | C9SLL7 | 3'-5' exonuclease domain-containing protein. | Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family. | 0.996 |
| VDBG_00140 | VDBG_05916 | C9S8V6 | C9SLZ2 | 3'-5' exonuclease domain-containing protein. | Cell cycle checkpoint protein RAD17. | 0.987 |
| VDBG_00140 | VDBG_06588 | C9S8V6 | C9SNW3 | 3'-5' exonuclease domain-containing protein. | BRCT domain-containing protein. | 0.828 |
| VDBG_00140 | VDBG_06833 | C9S8V6 | C9SPK8 | 3'-5' exonuclease domain-containing protein. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.989 |
| VDBG_00140 | VDBG_07227 | C9S8V6 | C9SQJ2 | 3'-5' exonuclease domain-containing protein. | DNA repair protein RAD50. | 0.984 |
| VDBG_00140 | VDBG_08268 | C9S8V6 | C9STJ7 | 3'-5' exonuclease domain-containing protein. | Ku70. | 0.996 |
| VDBG_01666 | VDBG_00140 | C9SAY3 | C9S8V6 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 3'-5' exonuclease domain-containing protein. | 0.998 |
| VDBG_01666 | VDBG_04420 | C9SAY3 | C9SJE9 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.820 |
| VDBG_01666 | VDBG_05694 | C9SAY3 | C9SLL7 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family. | 0.974 |
| VDBG_01666 | VDBG_05916 | C9SAY3 | C9SLZ2 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | Cell cycle checkpoint protein RAD17. | 0.945 |
| VDBG_01666 | VDBG_06588 | C9SAY3 | C9SNW3 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | BRCT domain-containing protein. | 0.942 |
| VDBG_01666 | VDBG_06833 | C9SAY3 | C9SPK8 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.998 |
| VDBG_01666 | VDBG_07227 | C9SAY3 | C9SQJ2 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | DNA repair protein RAD50. | 0.932 |
| VDBG_01666 | VDBG_08268 | C9SAY3 | C9STJ7 | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | Ku70. | 0.728 |
| VDBG_04420 | VDBG_00140 | C9SJE9 | C9S8V6 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 3'-5' exonuclease domain-containing protein. | 0.998 |
| VDBG_04420 | VDBG_01666 | C9SJE9 | C9SAY3 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 0.820 |
| VDBG_04420 | VDBG_05694 | C9SJE9 | C9SLL7 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Double-strand break repair protein mus-23; Belongs to the MRE11/RAD32 family. | 0.938 |
| VDBG_04420 | VDBG_05916 | C9SJE9 | C9SLZ2 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Cell cycle checkpoint protein RAD17. | 0.690 |
page 1 of 5