Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01314 | VDBG_01497 | C9S728 | C9SAB1 | Myosin regulatory light chain cdc4. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.542 |
VDBG_01314 | VDBG_02064 | C9S728 | C9SC71 | Myosin regulatory light chain cdc4. | Uncharacterized protein. | 0.502 |
VDBG_01314 | VDBG_03360 | C9S728 | C9SE04 | Myosin regulatory light chain cdc4. | Inner centromere protein mis6. | 0.480 |
VDBG_01314 | VDBG_06146 | C9S728 | C9SMM2 | Myosin regulatory light chain cdc4. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.542 |
VDBG_01314 | VDBG_06402 | C9S728 | C9SNC7 | Myosin regulatory light chain cdc4. | Uncharacterized protein. | 0.456 |
VDBG_01314 | VDBG_07260 | C9S728 | C9SQM5 | Myosin regulatory light chain cdc4. | MAP kinase kinase skh1/pek1. | 0.721 |
VDBG_01314 | VDBG_08181 | C9S728 | C9STF6 | Myosin regulatory light chain cdc4. | Tubulin beta-2 chain. | 0.480 |
VDBG_01314 | VDBG_09353 | C9S728 | C9SX53 | Myosin regulatory light chain cdc4. | Calmodulin; Belongs to the calmodulin family. | 0.588 |
VDBG_01497 | VDBG_01314 | C9SAB1 | C9S728 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Myosin regulatory light chain cdc4. | 0.542 |
VDBG_01497 | VDBG_02064 | C9SAB1 | C9SC71 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Uncharacterized protein. | 0.542 |
VDBG_01497 | VDBG_02592 | C9SAB1 | C9SE74 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Predicted protein. | 0.539 |
VDBG_01497 | VDBG_03360 | C9SAB1 | C9SE04 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Inner centromere protein mis6. | 0.917 |
VDBG_01497 | VDBG_04469 | C9SAB1 | C9SJJ8 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Calmodulin. | 0.542 |
VDBG_01497 | VDBG_06146 | C9SAB1 | C9SMM2 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.901 |
VDBG_01497 | VDBG_06402 | C9SAB1 | C9SNC7 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Uncharacterized protein. | 0.904 |
VDBG_01497 | VDBG_07260 | C9SAB1 | C9SQM5 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | MAP kinase kinase skh1/pek1. | 0.936 |
VDBG_01497 | VDBG_08181 | C9SAB1 | C9STF6 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Tubulin beta-2 chain. | 0.985 |
VDBG_01497 | VDBG_09353 | C9SAB1 | C9SX53 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Calmodulin; Belongs to the calmodulin family. | 0.590 |
VDBG_02064 | VDBG_01314 | C9SC71 | C9S728 | Uncharacterized protein. | Myosin regulatory light chain cdc4. | 0.502 |
VDBG_02064 | VDBG_01497 | C9SC71 | C9SAB1 | Uncharacterized protein. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.542 |
page 1 of 5