Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPS1 | VDBG_00187 | C9S819 | C9S932 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | LTV1. | 0.967 |
RPS1 | VDBG_00290 | C9S819 | C9S583 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 60S ribosomal protein L10. | 0.999 |
RPS1 | VDBG_00291 | C9S819 | C9S584 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 60S ribosomal protein L30-1. | 0.999 |
RPS1 | VDBG_00448 | C9S819 | C9S602 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 40S ribosomal protein S19. | 0.999 |
RPS1 | VDBG_00621 | C9S819 | C9S6M2 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.998 |
RPS1 | VDBG_00851 | C9S819 | C9S7I1 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | Elongation factor 2. | 0.997 |
RPS1 | VDBG_01067 | C9S819 | C9S8Y5 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | Bystin. | 0.985 |
RPS1 | VDBG_02085 | C9S819 | C9S9B3 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 40S ribosomal protein S4-A. | 0.999 |
RPS1 | VDBG_02135 | C9S819 | C9S9G3 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
RPS1 | VDBG_07341 | C9S819 | C9SQV6 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
VDBG_00187 | RPS1 | C9S932 | C9S819 | LTV1. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.967 |
VDBG_00187 | VDBG_00448 | C9S932 | C9S602 | LTV1. | 40S ribosomal protein S19. | 0.963 |
VDBG_00187 | VDBG_01067 | C9S932 | C9S8Y5 | LTV1. | Bystin. | 0.999 |
VDBG_00187 | VDBG_02085 | C9S932 | C9S9B3 | LTV1. | 40S ribosomal protein S4-A. | 0.915 |
VDBG_00187 | VDBG_02135 | C9S932 | C9S9G3 | LTV1. | 40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.763 |
VDBG_00187 | VDBG_07341 | C9S932 | C9SQV6 | LTV1. | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
VDBG_00290 | RPS1 | C9S583 | C9S819 | 60S ribosomal protein L10. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
VDBG_00290 | VDBG_00291 | C9S583 | C9S584 | 60S ribosomal protein L10. | 60S ribosomal protein L30-1. | 0.999 |
VDBG_00290 | VDBG_00448 | C9S583 | C9S602 | 60S ribosomal protein L10. | 40S ribosomal protein S19. | 0.999 |
VDBG_00290 | VDBG_00621 | C9S583 | C9S6M2 | 60S ribosomal protein L10. | 60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.999 |
page 1 of 5