STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_074261,3-beta-glucan synthase component GLS2. (582 aa)    
Predicted Functional Partners:
VDBG_07424
1,3-beta-glucan synthase component bgs4.
 
  
 0.995
VDBG_07425
1,3-beta-glucan synthase component bgs4.
 
   
 0.955
VDBG_07423
1,3-beta-glucan synthase component GLS2.
 
     0.947
VDBG_05863
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.917
VDBG_04164
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
     
 0.905
VDBG_03081
Alpha,alpha-trehalose-phosphate synthase.
     
 0.903
VDBG_08083
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.903
VDBG_07485
Trehalose-phosphatase.
     
 0.902
VDBG_02343
Glucan 1,3-beta-glucosidase.
    
  0.901
VDBG_02382
Trehalose synthase complex regulatory subunit TPS3.
     
 0.901
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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