Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_02112 | VDBG_03989 | C9S9E0 | C9SF94 | Phosphopantothenoylcysteine decarboxylase. | CMP/dCMP-type deaminase domain-containing protein. | 0.490 |
VDBG_02112 | VDBG_07566 | C9S9E0 | C9SRP1 | Phosphopantothenoylcysteine decarboxylase. | FCY1p. | 0.491 |
VDBG_03491 | VDBG_03989 | C9SFX8 | C9SF94 | Bifunctional dihydrofolate reductase-thymidylate synthase. | CMP/dCMP-type deaminase domain-containing protein. | 0.464 |
VDBG_03491 | VDBG_07566 | C9SFX8 | C9SRP1 | Bifunctional dihydrofolate reductase-thymidylate synthase. | FCY1p. | 0.465 |
VDBG_03989 | VDBG_02112 | C9SF94 | C9S9E0 | CMP/dCMP-type deaminase domain-containing protein. | Phosphopantothenoylcysteine decarboxylase. | 0.490 |
VDBG_03989 | VDBG_03491 | C9SF94 | C9SFX8 | CMP/dCMP-type deaminase domain-containing protein. | Bifunctional dihydrofolate reductase-thymidylate synthase. | 0.464 |
VDBG_03989 | VDBG_05801 | C9SF94 | C9SJS8 | CMP/dCMP-type deaminase domain-containing protein. | Xanthine dehydrogenase. | 0.429 |
VDBG_03989 | VDBG_07566 | C9SF94 | C9SRP1 | CMP/dCMP-type deaminase domain-containing protein. | FCY1p. | 0.682 |
VDBG_03989 | VDBG_07977 | C9SF94 | C9SSV2 | CMP/dCMP-type deaminase domain-containing protein. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.456 |
VDBG_03989 | VDBG_08010 | C9SF94 | C9SSY5 | CMP/dCMP-type deaminase domain-containing protein. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.453 |
VDBG_03989 | VDBG_09038 | C9SF94 | C9SVW3 | CMP/dCMP-type deaminase domain-containing protein. | Lactoylglutathione lyase. | 0.453 |
VDBG_05801 | VDBG_03989 | C9SJS8 | C9SF94 | Xanthine dehydrogenase. | CMP/dCMP-type deaminase domain-containing protein. | 0.429 |
VDBG_05801 | VDBG_07566 | C9SJS8 | C9SRP1 | Xanthine dehydrogenase. | FCY1p. | 0.431 |
VDBG_05801 | VDBG_07977 | C9SJS8 | C9SSV2 | Xanthine dehydrogenase. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.813 |
VDBG_07566 | VDBG_02112 | C9SRP1 | C9S9E0 | FCY1p. | Phosphopantothenoylcysteine decarboxylase. | 0.491 |
VDBG_07566 | VDBG_03491 | C9SRP1 | C9SFX8 | FCY1p. | Bifunctional dihydrofolate reductase-thymidylate synthase. | 0.465 |
VDBG_07566 | VDBG_03989 | C9SRP1 | C9SF94 | FCY1p. | CMP/dCMP-type deaminase domain-containing protein. | 0.682 |
VDBG_07566 | VDBG_05801 | C9SRP1 | C9SJS8 | FCY1p. | Xanthine dehydrogenase. | 0.431 |
VDBG_07566 | VDBG_07977 | C9SRP1 | C9SSV2 | FCY1p. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.456 |
VDBG_07566 | VDBG_08010 | C9SRP1 | C9SSY5 | FCY1p. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.453 |
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