Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00963 | VDBG_02031 | C9S7W9 | C9SC38 | Translocation protein SEC62. | Uncharacterized protein. | 0.989 |
VDBG_00963 | VDBG_02643 | C9S7W9 | C9SEE1 | Translocation protein SEC62. | Translocation protein sec63. | 0.996 |
VDBG_00963 | VDBG_03841 | C9S7W9 | C9SHD8 | Translocation protein SEC62. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.946 |
VDBG_00963 | VDBG_04643 | C9S7W9 | C9SHW1 | Translocation protein SEC62. | Translocation protein sec66. | 0.989 |
VDBG_00963 | VDBG_06543 | C9S7W9 | C9SNR8 | Translocation protein SEC62. | Transport protein SEC61 subunit alpha. | 0.989 |
VDBG_00963 | VDBG_07727 | C9S7W9 | C9SS52 | Translocation protein SEC62. | Predicted protein. | 0.725 |
VDBG_01486 | VDBG_07727 | C9SAA0 | C9SS52 | Conidiophore development protein hymA. | Predicted protein. | 0.485 |
VDBG_02031 | VDBG_00963 | C9SC38 | C9S7W9 | Uncharacterized protein. | Translocation protein SEC62. | 0.989 |
VDBG_02031 | VDBG_02643 | C9SC38 | C9SEE1 | Uncharacterized protein. | Translocation protein sec63. | 0.955 |
VDBG_02031 | VDBG_03841 | C9SC38 | C9SHD8 | Uncharacterized protein. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.999 |
VDBG_02031 | VDBG_04643 | C9SC38 | C9SHW1 | Uncharacterized protein. | Translocation protein sec66. | 0.989 |
VDBG_02031 | VDBG_06543 | C9SC38 | C9SNR8 | Uncharacterized protein. | Transport protein SEC61 subunit alpha. | 0.999 |
VDBG_02031 | VDBG_07727 | C9SC38 | C9SS52 | Uncharacterized protein. | Predicted protein. | 0.730 |
VDBG_02643 | VDBG_00963 | C9SEE1 | C9S7W9 | Translocation protein sec63. | Translocation protein SEC62. | 0.996 |
VDBG_02643 | VDBG_02031 | C9SEE1 | C9SC38 | Translocation protein sec63. | Uncharacterized protein. | 0.955 |
VDBG_02643 | VDBG_03841 | C9SEE1 | C9SHD8 | Translocation protein sec63. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.945 |
VDBG_02643 | VDBG_04643 | C9SEE1 | C9SHW1 | Translocation protein sec63. | Translocation protein sec66. | 0.994 |
VDBG_02643 | VDBG_06543 | C9SEE1 | C9SNR8 | Translocation protein sec63. | Transport protein SEC61 subunit alpha. | 0.976 |
VDBG_02643 | VDBG_07727 | C9SEE1 | C9SS52 | Translocation protein sec63. | Predicted protein. | 0.729 |
VDBG_03841 | VDBG_00963 | C9SHD8 | C9S7W9 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | Translocation protein SEC62. | 0.946 |
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