STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_08006N-acetyltransferase domain-containing protein. (470 aa)    
Predicted Functional Partners:
VDBG_04943
Chitooligosaccharidolytic beta-N-acetylglucosaminidase.
     
 0.913
VDBG_03177
Glycosyl hydrolase.
     
 0.907
VDBG_08005
Beta-hexosaminidase.
 
      0.900
VDBG_08003
Phosphate-non-repressible acid phosphatase.
 
    
 0.660
VDBG_00710
Endochitinase; Belongs to the glycosyl hydrolase 18 family.
     
 0.654
VDBG_03258
Oviduct-specific glycoprotein; Belongs to the glycosyl hydrolase 18 family.
     
  0.650
VDBG_03556
Endochitinase; Belongs to the glycosyl hydrolase 18 family.
     
  0.650
VDBG_04876
Chitinase; Belongs to the glycosyl hydrolase 18 family.
     
  0.650
VDBG_04479
Endochitinase; Belongs to the glycosyl hydrolase 18 family.
     
  0.650
VDBG_07187
Chitinase; Belongs to the glycosyl hydrolase 18 family.
     
  0.650
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.